Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00297 ATGGCTCGGTCTACACCTTTGTTTTCCACCATTTTTGTCCTCCTTCTACTTCTTCTGGCTACTGAGATGGGACCAATGGTAGCAGAAGCAAGGATATGTGAGTCTCAGAGCCACCGTTTCAAGGGAGTCTGTGTGAGGAAATCTAACTGCGCCGCCGTTTGCCAAACCGAGGGCTTCCCCGGCGGGCACTGCCGTGGCTTCCGCCGCCGCTGCTTCTGCACCAAACCTTGTGCGTA 236 0.5508 MARSTPLFSTIFVLLLLLLATEMGPMVAEARICESQSHRFKGVCVRKSNCAAVCQTEGFPGGHCRGFRRRCFCTKPCA 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00297 78 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Bva11g00297 78 Gene3D - 31 77 IPR036574 -
Bva11g00297 78 PANTHER DEFENSIN-LIKE PROTEIN 1 1 77 - -
Bva11g00297 78 SMART gth_4 32 77 IPR003614 GO:0006952
Bva11g00297 78 PANTHER DEFENSIN PROTEIN 1 77 - -
Bva11g00297 78 SUPERFAMILY Scorpion toxin-like 31 77 IPR036574 -
Bva11g00297 78 Pfam Gamma-thionin family 31 77 - -
Bva11g00297 78 PRINTS Purothionin signature 32 47 IPR008176 GO:0006952
Bva11g00297 78 PRINTS Purothionin signature 62 76 IPR008176 GO:0006952
Bva11g00297 78 CDD Knot1 42 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00297 Bva-Chr11 6668668 6669164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00297 1 77 Plant Defensins Gene Families AT2G02100 61.039 6.72e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00297 - - nnu:104592925 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00297 11 6668668 6669164 Bva11g00297 11 6668668 6669164 ECH