Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00295 ATGGAGTGTCTAACCATGGTAGGTGAGAAATTACTGGACTACACATTGGCACCAATGGCACGCCAAGTTGGTTATTTGATATTCTACAACAACAATGTGAAGGAATTAACGGAGAAAGCTGAGAATCTACAACATGCAAGAGAAAGTGTGCAAAACAGAATTGATGCTGCTCATAGAAATGGAGATGAGATTTACAATGTTGTTCGCACGTGGCTAGAAAAAGTAGATGAAATGTCTAGGAAGGTGGAGGGTCATATCCAAGACGATCACCACAAGAAGACAGGGTGCTCTGGCAGATCATTGCCTAATCTTTGGATGAGACATCAGTTAAGTAGGAAGTCAAAAAAGATGGGGCAAGAGattgaaaatataaggaaTGAGGGACAATTTGAGCATGTTTCTTTCCAGAAAGCTCCTAATTTGATACAAAACCTTTCATCAACCACATGTGACGAGGACTTTGGATCAAGGGTTGAAACACTTGAAGCCATTATGGAGGCACTGAGACATCCTAATGTGAACAAGATCGGAGTATATGGGATGGCAGGTGTGGGGAAGTCCACTTTAGTCAAACAGGTTGCACAGAAAGCTCAACAAGAGTTTGATGTGGTAGTCATGGCAACTATAACACAGAATCCAGAAGTGGAGAAAATCCAAGGGCAAATTGCTGACATGTTGGGACTCAATTTTAGTAGTGAGCAAAGTTCAATTGGAAGAGCAGGTCGTCTTCATGAGAgactgaaaaaagaaaaaaatgttttgttaatTCTAGATGATCTTTGGGGGGAGCTTAATTGGGGTGAGATTGGCATTCCTTCCCTAGAGGAGAacaacaataagaaaataagcatTTCCTCTGAAATTCAACAGAGGAGTTGCAAATTCTTAATGACCTCTAGGGATCGGGATGTTTTGTCAAAATTGAATGCCCAAAAGTACTTTTTGGTGACGCCACTATCAGATATTGAAGCTTGGAAGCTGTTCGAGGAAAAGGCTATGCTTGATGGGTCTATTGGCAATGCTGAATTGCATTCTATAGCAAATGAAGTTGCTCAAGAGTGTGGTGGGTTGCCACTTGCTATTGTAACTGTTgcaaattcattaaaaaacaagagaatatCAGAGTGGAAGGTTGTCTTGCAAGAACTAAGAAATCCTGCTCCAACAGGTATGCAGAATGCTATATATAGATCAATTGAAGTGAGttaccaaaatttaaaagatgatCTCCTCCAGTCACTTTTCTTGCTTTGTGGAATGTTTGCACAAAATGCTTCGATTAGAGATTTGTTCAAGTATTCTGTTGGGCTAGATTTATTTAAACACATTCCTAAAGTGGAATATgctcaaaataaatttgattcatGTATTCATCAACTAAAAGACTCATGCTTGTTATTAGATATAGATAGTTCTAATGAGTATTGCGGAATTCATGATGTTGTCCAAGACGTGGCTTTATTGATTGCATCCAAGCATGAACATGTCtttgtgaaaagaaatgaaattttggaaGAATGGCCTGAGGAAgagcaaatgaaaaattgcaaGACAATCATAATAGaattttgtgatttaaatGGCCTTCTTGAAAGGCTGTGTTGTCCAAACCTCACGTTTTTTGTACTAAACAACCAAGACCCCTCTCTAAAACTGCCAAACaacttttttgaaagaatacCTAGACTCAAAGTACTGGATTTGACCAAGATGAAATTTGAGTCTTTACCTTCATCAATCAGTCTCTTGAGCAACCTACGTACCTTGTGTTTCTATTATTGTTCTTTGGAGAAAATAGAGGTCATTGGAGAGTTGAAGTGTTTAAAAGTCCTCAGCCTTGTAAAATCTGATATCAAACAATTGCCCAAAGAACTAGGGCAATTGACCCAGCTACAATTGCTGGACTTGACTGGCTGTTCTCAACTGAAATTAATCCCACCCAATACTTTGTCAAGCCTTAAAAAGTTAGAGGAGCTGTACATGAAAGACAGTTTTGTGAACTGGGACATTATTGATCCAATGGACCAGCAGCAAAGTAATTCTAATGTTTCTGAACTAGACAGTTTGCCTCTCTTGACCACATTAGTAGTTCATATTCCTGATGAGAGAATGTTGCCAAAAGTCCTGACCATTAGACTTCAAAAGTACAAAATACTTATAGGAAATGTCTGGGATTGGTCTTCTGAGACAGAAGCTTCAAGGATCCTGAAACTTTGGCTTAGCACTGACATTCACTGGAGAGATGATATCAAAAGACTGCTTGATACTGTTGAAGAATTGCACATTGGCAAATTGGAAGGAGCAAAAAATGTTCTTCCTGCCCTAAACAATGAAGGTTTGCCACAACTACAGCATCTTTATGTCAATCATAATGATGAGATTCAGTGTGTAATTAATTCGTTGGAGGTCATCCATTCTATTGATCTCTTCCCCAACTTGGAGTCAATGGTTCTTCAAAATGTAATGAACCTTGAAAGGTTATGCGGTGGGCCTTTTACTGGAGAATCCTTTTCCAAACTGAAgattattaaagtaaaaaattgtaGTAACTTGAGGAGCCTCTTCTCAGCTTCCCTTGCTAGAGGTCTTCCACAACTTGTTGAAATTGAACTTGAGGAATGTTTTCGTATGGAAAGAGTGGTTTATGATGATGAAAAGGCTGCTGGGATAGTCCAGTTTCCTAAATTATGCTCTTTAACAATACAATCTCTTCCTCAATTACTTGGATTCCATTATGAAGGCAATGTTCTTGGCACTTCAGTTACACTTTTTAGTGAGAAGGTTATGTTCCCTAGCTTAGAGAAATTGACTATCGATGGTCTGGATAAGTTGAATATGATATGGAATAGGCTTATGGCAGAAGACGATACTCACAATTCTCCTATTTGCGACAagATGAAAGAGACATGGCATGGCCAAATTGCTGACAGGTCATTTTGCAATTTGAAAAGTCTTAAAGTAGTAAATTGTAAAAAGATCTCAAAAGTACTCTCATTCAGTTTACTGAACCGTTTAAACAATTTGGAAGAGCTAGAAGTGAAAGATTGTAATTCAGTCAATGTAGTATTTGACTTGGAGAAGATCACCAGTGAAGAGAGACATATTGTACCAAAGTGCCACTTGaggaaattgattttattttccctaCCAAGTCTGAAGCATGTATGGAATAAAGATCCACAAGGAATTCTTGATTTTCAAAACCTATCTATAATAAAATCTGTGGATTGCCAACATATGAATTATCTGCTTCCAGTTTCTGTTGCCAAAGCTCTTCCCAACCTTCTGGAGTTGGCGCTAGAGAACTGTACTGAGCTAGAGACTATTGTTGCAATGGAAGAAGGACTAGATGCAACTGTCAGATTTATGTTCCCTAAAGTGACATTACTATGGCTTTGGGATCTACCAAAATTGAAAGGCTTCTACCCTGGAGGATATATAACAAAGTGGCCACAACTAAGAACATTAGTATTTCTATGTATTCCAAAAGAAGTGAACTGTTTTGGGTCAAAACATTTATGTTTCAGCGAGTCACGTTTTGAGGATGGACCCCAATCTTTAGTACAACAATCATCCTTTGTTGAAGAGGTCATCCCCAATTTACAAGAGTTGACATTAGATCAAGATGACTCTGCTCTATTGCGGAAAGTAGAAGTTGAATTGGAAGATAAGGACTGGTATTGGGAGGGTGACCTTAATAAAACTGTACAGAAGATGTATGCAAATAAGATTGGCTTGCGGAGCTTTGAGCTATTGAAACAAGAAGAATTTCCTGAGTTAAAGGAATTATGGCACGGCCAAGTTTCTGCAAAAGAATTCAAGAATTTGAGATCTGTAGTTGTGGACAGTTTTTCAAAGAAGCAAATCAAGAGCAGGGTCTTCATGTCTCAACTCAGCAGCCCATTTTCCTGGTGGAGAAGGTCTTCCCCAACTTGGAGGAATTGTCACTA 3950 0.3681 MECLTMVGEKLLDYTLAPMARQVGYLIFYNNNVKELTEKAENLQHARESVQNRIDAAHRNGDEIYNVVRTWLEKVDEMSRKVEGHIQDDHHKKTGCSGRSLPNLWMRHQLSRKSKKMGQEIENIRNEGQFEHVSFQKAPNLIQNLSSTTCDEDFGSRVETLEAIMEALRHPNVNKIGVYGMAGVGKSTLVKQVAQKAQQEFDVVVMATITQNPEVEKIQGQIADMLGLNFSSEQSSIGRAGRLHERLKKEKNVLLILDDLWGELNWGEIGIPSLEENNNKKISISSEIQQRSCKFLMTSRDRDVLSKLNAQKYFLVTPLSDIEAWKLFEEKAMLDGSIGNAELHSIANEVAQECGGLPLAIVTVANSLKNKRISEWKVVLQELRNPAPTGMQNAIYRSIEVSYQNLKDDLLQSLFLLCGMFAQNASIRDLFKYSVGLDLFKHIPKVEYAQNKFDSCIHQLKDSCLLLDIDSSNEYCGIHDVVQDVALLIASKHEHVFVKRNEILEEWPEEEQMKNCKTIIIEFCDLNGLLERLCCPNLTFFVLNNQDPSLKLPNNFFERIPRLKVLDLTKMKFESLPSSISLLSNLRTLCFYYCSLEKIEVIGELKCLKVLSLVKSDIKQLPKELGQLTQLQLLDLTGCSQLKLIPPNTLSSLKKLEELYMKDSFVNWDIIDPMDQQQSNSNVSELDSLPLLTTLVVHIPDERMLPKVLTIRLQKYKILIGNVWDWSSETEASRILKLWLSTDIHWRDDIKRLLDTVEELHIGKLEGAKNVLPALNNEGLPQLQHLYVNHNDEIQCVINSLEVIHSIDLFPNLESMVLQNVMNLERLCGGPFTGESFSKLKIIKVKNCSNLRSLFSASLARGLPQLVEIELEECFRMERVVYDDEKAAGIVQFPKLCSLTIQSLPQLLGFHYEGNVLGTSVTLFSEKVMFPSLEKLTIDGLDKLNMIWNRLMAEDDTHNSPICDKMKETWHGQIADRSFCNLKSLKVVNCKKISKVLSFSLLNRLNNLEELEVKDCNSVNVVFDLEKITSEERHIVPKCHLRKLILFSLPSLKHVWNKDPQGILDFQNLSIIKSVDCQHMNYLLPVSVAKALPNLLELALENCTELETIVAMEEGLDATVRFMFPKVTLLWLWDLPKLKGFYPGGYITKWPQLRTLVFLCIPKEVNCFGSKHLCFSESRFEDGPQSLVQQSSFVEEVIPNLQELTLDQDDSALLRKVEVELEDKDWYWEGDLNKTVQKMYANKIGLRSFELLKQEEFPELKELWHGQVSAKEFKNLRSVVVDSFSKKQIKSRVFMSQLSSPFSWWRRSSPTWRNCH 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00295 1316 PRINTS Disease resistance protein signature 175 190 - -
Bva11g00295 1316 PRINTS Disease resistance protein signature 354 368 - -
Bva11g00295 1316 PRINTS Disease resistance protein signature 247 261 - -
Bva11g00295 1316 PRINTS Disease resistance protein signature 626 642 - -
Bva11g00295 1316 SUPERFAMILY RNI-like 780 1157 - -
Bva11g00295 1316 Pfam NB-ARC domain 160 405 IPR002182 GO:0043531
Bva11g00295 1316 Gene3D Ribonuclease Inhibitor 531 768 IPR032675 -
Bva11g00295 1316 PANTHER - 7 952 - -
Bva11g00295 1316 PANTHER PHOSPHATASE, PUTATIVE-RELATED 7 952 - -
Bva11g00295 1316 SUPERFAMILY L domain-like 479 908 - -
Bva11g00295 1316 Coils Coil 26 60 - -
Bva11g00295 1316 PANTHER - 965 1217 - -
Bva11g00295 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 418 IPR027417 -
Bva11g00295 1316 Coils Coil 107 127 - -
Bva11g00295 1316 Gene3D Ribonuclease Inhibitor 769 967 IPR032675 -
Bva11g00295 1316 Gene3D Ribonuclease Inhibitor 968 1209 IPR032675 -
Bva11g00295 1316 Gene3D - 137 315 IPR027417 -
Bva11g00295 1316 Gene3D - 319 407 IPR042197 -
Bva11g00295 1316 PANTHER PHOSPHATASE, PUTATIVE-RELATED 965 1217 - -
Bva11g00295 1316 SMART AAA_5 172 318 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00295 Bva-Chr11 6643389 6657423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00295 172 648 WRKY Transcription Factor Family AT5G45050 21.875 6.48e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00295 - - qsu:112006682 719.153