Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00287 ATGGAGTGTCTAACCATGGTAGCTGAGAAAATACTGGACTACACAATGGCCCCAGTGGCACGACAGGTTGGTTATCTGTTATTCTACAACAGCAATGTGAAGgaattgaaggagaaaactGAGAATCTGCTGCATGCGAGAGAAAGTGTGCAAACAAGAGTCGAGGCTGCCTTTAGAAATGGATATGAGATTCACAATGGTGTTCATGCATGGCTACAAAAAGTAGATGAAATGGCGAGGAAGGTGGAGGGTCATATTCAGGATGACCACCACAAGAAGACAGGGTGCTCTAGCAGATCATTTCCTAAATTTTGGATGAGACATCAGTTAAGCAGGAAGTCAAAGAAGATGGTTCAAGAGATTGAAATCCTCAAGAAAGAGGGACAATTTGAGCATGTCTCTTACCGGAAAGCTCTTAATTTGATACAAAACCTTTCATCAGCCACAGGTGATGAGGACTTTGGATCAAGGGTTGAAACACTTGAAGCCATTATGGAGGCACTGAGAGATCCTAATGTGAACAAGATCGGAGTATATGGGATGGGCGGTGTGGGAAAGTCCACTTTAGTCAAACAGGTTGCGCAGAAAGCTCAACAAGAGTTTGATGTGGTAGTCATGGCAACTATAACACAGAATCCAGAAGTGGAGAAAATCCAGGGGCAAATTGCTGACATGTTGGGACTTAATTTGAGTAATGAGCAAAGTTTAATGGGTAGAGCAAGTCGTCTCCTTGAgagattaaagaaagaaaaaaatgttctgATAATTCTAGATGATCTCTGGGAAAAGCTTAACTGGGATGACATTGGCATTCCATTTCTAGAGGAGCACAAATacaacaataagaaaataaacatcTCCTCTGAAATGCACCAGAGGGATTGTAAATTCTTAATGACCTCTAGGATTCGAGAGGTTTTGTCAAATATGAATTCCCAAAAGCATTTTTTCTTGAGGCCATTGCAGGATATTGAAGCTTGGAAGTTGTTCAAGGATAAGGCTGAGCTTGATGAGTCTATTGGCAATGGTGAATTGCTTTCTATAGCACGTGAAGTTGCTGAAGAGTGTGGTGGGTTGCCACTTGCTGTTGTAACTATTGCGAGTTcattaaaaaacaagagaatatCAGAGTGGAAGGTTGTCTTGCAAGAACTAAGAAATCCTGCTCCAACAGGTATGCagaatgatatatatagaCCAATTGAAGTGAGttaccaaaatttaaaagatgatCTCCTCCAGTCACTTTTCCTGCTTTGTGGAATATTTCCGCAGAATGTTTGGATTAGTGATTTGTTTAAGTATTCTGTTGGGCTAGACTTATTTAAACACATTCCTAAAGTGGAATATGCtcgaaataaatttgattcgTGTATTCGTAAACTAAAAGACTCATGCTTGTTATTAGATACAGATAGTTCTAATGAGCATTGCGAAATTCATGATGTTGTCCGAGATGTGGCCTTAAAGATAGCATTGCAGCATCAACAttgttttgtgaaaataaatgaactttTGGAAGAATGGCCTGAGGAAgagcaaatgaaaaattgtaaGACAATCATATTACAGTACTGTGATTTAAATGGCATTTTTGAAAGGCTCTGTTGTCCAAACCTCACCTTTCTTTTAATAGACAATGAAGACCCCTCTCTAAAACTATCAGACAACTGTTTTGAAGGAATGCCTAGACTCAAAGTACTAGATTTGACTAGGATGAAATTGGAGTTCTTACCTTTATCAATTAGTCTCTTGAGCACTCTTCGTACCTTGTGTCTCGACCAGTgttctttaagaaaaacagAGGTCATTGGAAAGTTGAAGTGTTTAAAAGTCCTCAGCTTTTTGAAATCTGATATCAAACAATTGCCCGAAGAACTAGGGCAATTGACCCAGCTACAATTACTGGACTTGACTGCCTGTTCTCAACTAAAATTAATCCCACCCAATACCTTGTCAAGCCTTAAAAAGTTAGAAGAGCTGTACATGGCAGACAGTTTTGTGAACTGGGACGTTATTGATCCAATGGACCAGCAGCAAAGTAATGCTAGTGTTGCTGAACTAGACAATTTGCCTCTCTTGACCACATTAGTAGTTCATATTCCTGATGAGAGAATGTTGCCAAAAGTCCTGACCTTTGAAAGACTTCAAAAGTACAAAATACTTATAGGAAATGTCTGGGATTGGTCTTCTGAGACAGAAACTTCAAGGATCCTGAAGCTTTGGCTTAGCACTAGCATTCACTTGAGAGATGATGTCAAAAGACTGCTTGACACTGTTGAAGAATTGCACATTGGCAAATTGGAAGGAGCAATGAATGTTCTTCCTGCCCTAAACAATGAAGGTTTATCACAACTACAGCATCTTTATGTCACTGATAATGATGAGATTCAGTGTGTAATTAACTCATTGGAGGTCATCCATTCCATTGATCTCTTCCCCAACTTGAAGTCAATGGTTCTCCAAAATGTAATGAACCTTGAAAAGTTATGCAGTGGGTCTCTTACTGGAGAATCCTTTTCTAAACTGAAGactataaaagtaaaaaactgTGTTAACTTGAGGAGCCTGTTGTCAGCTTCCATTGCTAGAAGTCTTCCACAACTTGTTGAAATTGAACTTGAGGAATGTTTTCTTATGGAAAGAGTGGTTTACGATGATGAAAAGGCTGCTGGCATACTCCAATTTCCTAAGTTATGCTCTTTAACTATACAATCTCTTCCTCAATTACTTGGATTCTATTATGAAGACAATGATCTTGGCACTTCGGATGCACTTTTTTGTGAGAAGGTTATGTTCCCTAGCTTAGAGAAATTGACTATCGATGATCTGGATAAGTTGAATATGATATGGAATAGACTTATGGCAGAAGACAATACTCACAATTCTTCTATTCATGACAAGATGAAAGAGACATGGTATAACCAAATTGCTGATAGGTCATTTTGCAATTTGAAAAtgctcaaaatatttaattgcgAAGGGATCTCAAAAGTACTCTCATTTAGCTTACTGAACCTTCTAAACAATTTGGAAGAGCTAGAAGTGGAACATTGTAATTCAGTCGAGGTGATATTTGACTTGGAGAAGATCACCAGTGAAGAGAGACATGTTGTACCAAAGTGCCACTTGAggaaattgattttcttttccctacCAAATCTGAAGCATATATGGAATAAAGATCCACAAGGAATTcttgattttcaaaacttatCTATCATAAAAGCTATCATTTGCCAACATATGAATTATCTGCTTCCAGTTTCTGTTGCCAAAGCTCTTCCCAACCTTCTGGAGTTGGTGTTAGAGAAATGTACTGGGTTAGAGAATATTGTTGCAAAGCAAGAAGGACTAGATACAGCCATCAGTTTTATGTTCCCTAAAGTGAAATACATGAGGCTTTGGTCAAAATATACATGTAGCAGAGAGTCATATTTTGATGATCGACCCCAAACTTTAGTTCAAGAATCGTCCTCGGTTGAAGAGGTTATCCCCAACTTACAAGAGTTGACACTAGATCAAGATGACTCTACTCTAGTGACTTGGTTATTAGAACATTCAAAAAACTACTTTAGCAGAATAAAAGTTCTGAAACTACAATTCTTTCAAGAACAAATGAGTTTATCATATTCATTCTTTCAAAGAATATCTAAGGTGGAAGTTCTTGTTGTGGCACATAAttcatttgaagaaatattcCCTTGTGAGAACCAAGCTGGTGATGGAACAGAGCATGAAAATGTAGTACaggtaaaaaatttataccttGAGGATCTTCCTAAATTAAGGCAAATATGCAAAGAAGGTTATAATATAAGGTTGAATGAACTTATGGTTCGGGAGTGTCCCTGTTTGTTGAACTTAGTGCCCTCATCGATAATAATGAGCCATCTTACATcactatatgtatataaatgtgAGGGCCTGTTATATTTAGTGGCACCATCCACAGCAAAAAGCATGAGTCAACTCACTGTTATGAAGATAGAGGACTGCAAGATGATAAAGGAAATAGTAGCAGACAAGGTTAATGCTGACGCTGAAGAAGGAGATCATGAGATTACATTcagcaaaatgaaaatcatacAACTTCTGAGTTTACCATTGCTGGAGAGCTTTTCTTCAGGGAATTATGCATTCAAATTTCCATCTTTGGAAAATGCACTTATCTGTGAATGCCCGAATTTAAAGATATTCTCTAAAGGGGTCCCCATCACACCAAAGCTGCGGAAAGTAGATGTTGAATTGGAAAAAATGGACTGGTATTGGGAGGGCGACCTTAATAAAACTGTACAGAAGATGTATGTAAATAAGGAGGCCTATGTTAGTGAGGATTCCTTGTCACATATGGGCAATGATCACCTTGAAGGCCATCCTCCAGTGGAGACAAAGATGAATGAAATTGAATTGGTTGAAGGTGGCCAAGTATTTGATGTAGAACTTCTCTCGGCATCAGGGGGcacaaaagaggaaaaatatgACTTGCAAATACCTCAACAGCAGATTCCAAAATTAGAGGTGGCTCCAGAAACTGAGACTGCACAGACTCAAAAACAAGCTTCCATCACAATTTCTGGAGCAGTCCATATTGAAGGGGTGTATGTACAAAGCAAGGATGAGAGCACTGATACTCAAACCAACAAGGCATCATTGTCAGATGCAGATGTTATTTCTGATCAGAACAAAGAAATCAGTCTAGTTTGGCAAACTGAAGATAGCATTCAAGACCAAGGTGTCTCTTCTATTATAGGCCAGAAAGGAACTACTCTTGATACAAGCAGTATggatattatatttgaaaaagacATCAAGGATTCTACTTTTGATGATGAAGGTGGTGGTGTTCTTGGTGATGGTAATGAGGTGGTTGTCTATGGCCAGGGTACCATGAGTATTTCTACTAGCATTAATGTGACTCCTTCATCAGGCGAAATTGATGCTGCTACTCATGTGTTCTATGAGGAACCTACTTCAGAAGATGCAGTTTCTGGTTATGGGACAACTTCGGAATCAGTTTGTGCATCACCACCTAAACCAGCAGTTAGTGCTGATTCTTCCATTACCAACACAAATTGCACTACAAACATCGCAATCCCTGAGGGCTTAAGGAAGTTTAGAGATACCATTGAGCTAAACGATGAGGACATTGCTTTGGTGAAGCAAGCAGTTGCTCAATGTCCTAATCTGTTGGAAATAAAGGGAAGCTTTAGAGCTCGTTTCTATGGCTTGGCTTACAAAACATTGGCAGAGTTGTTACACTTTCTAAATACTGAGAGTGCTCTGACCATCACCCAAGAGCATGAGCAAATGTTTCAAATGATGTGTGATGAGACTATTCAATTTGGTTTTGATAGAAAATGGGTGGAAGAGATGAGAAAGTGCGTTGCAAGAGATCCAGAAGTCGATCGTGCCCAGAAGCGGCTTAAGGAATTAAGGCAAGAGATGGATACgttggaaaaaaatttattagatagGAACAAATGTTTTCGATCTATGTG 5501 0.3661 MECLTMVAEKILDYTMAPVARQVGYLLFYNSNVKELKEKTENLLHARESVQTRVEAAFRNGYEIHNGVHAWLQKVDEMARKVEGHIQDDHHKKTGCSSRSFPKFWMRHQLSRKSKKMVQEIEILKKEGQFEHVSYRKALNLIQNLSSATGDEDFGSRVETLEAIMEALRDPNVNKIGVYGMGGVGKSTLVKQVAQKAQQEFDVVVMATITQNPEVEKIQGQIADMLGLNLSNEQSLMGRASRLLERLKKEKNVLIILDDLWEKLNWDDIGIPFLEEHKYNNKKINISSEMHQRDCKFLMTSRIREVLSNMNSQKHFFLRPLQDIEAWKLFKDKAELDESIGNGELLSIAREVAEECGGLPLAVVTIASSLKNKRISEWKVVLQELRNPAPTGMQNDIYRPIEVSYQNLKDDLLQSLFLLCGIFPQNVWISDLFKYSVGLDLFKHIPKVEYARNKFDSCIRKLKDSCLLLDTDSSNEHCEIHDVVRDVALKIALQHQHCFVKINELLEEWPEEEQMKNCKTIILQYCDLNGIFERLCCPNLTFLLIDNEDPSLKLSDNCFEGMPRLKVLDLTRMKLEFLPLSISLLSTLRTLCLDQCSLRKTEVIGKLKCLKVLSFLKSDIKQLPEELGQLTQLQLLDLTACSQLKLIPPNTLSSLKKLEELYMADSFVNWDVIDPMDQQQSNASVAELDNLPLLTTLVVHIPDERMLPKVLTFERLQKYKILIGNVWDWSSETETSRILKLWLSTSIHLRDDVKRLLDTVEELHIGKLEGAMNVLPALNNEGLSQLQHLYVTDNDEIQCVINSLEVIHSIDLFPNLKSMVLQNVMNLEKLCSGSLTGESFSKLKTIKVKNCVNLRSLLSASIARSLPQLVEIELEECFLMERVVYDDEKAAGILQFPKLCSLTIQSLPQLLGFYYEDNDLGTSDALFCEKVMFPSLEKLTIDDLDKLNMIWNRLMAEDNTHNSSIHDKMKETWYNQIADRSFCNLKMLKIFNCEGISKVLSFSLLNLLNNLEELEVEHCNSVEVIFDLEKITSEERHVVPKCHLRKLIFFSLPNLKHIWNKDPQGILDFQNLSIIKAIICQHMNYLLPVSVAKALPNLLELVLEKCTGLENIVAKQEGLDTAISFMFPKVKYMRLWSKYTCSRESYFDDRPQTLVQESSSVEEVIPNLQELTLDQDDSTLVTWLLEHSKNYFSRIKVLKLQFFQEQMSLSYSFFQRISKVEVLVVAHNSFEEIFPCENQAGDGTEHENVVQVKNLYLEDLPKLRQICKEGYNIRLNELMVRECPCLLNLVPSSIIMSHLTSLYVYKCEGLLYLVAPSTAKSMSQLTVMKIEDCKMIKEIVADKVNADAEEGDHEITFSKMKIIQLLSLPLLESFSSGNYAFKFPSLENALICECPNLKIFSKGVPITPKLRKVDVELEKMDWYWEGDLNKTVQKMYVNKEAYVSEDSLSHMGNDHLEGHPPVETKMNEIELVEGGQVFDVELLSASGGTKEEKYDLQIPQQQIPKLEVAPETETAQTQKQASITISGAVHIEGVYVQSKDESTDTQTNKASLSDADVISDQNKEISLVWQTEDSIQDQGVSSIIGQKGTTLDTSSMDIIFEKDIKDSTFDDEGGGVLGDGNEVVVYGQGTMSISTSINVTPSSGEIDAATHVFYEEPTSEDAVSGYGTTSESVCASPPKPAVSADSSITNTNCTTNIAIPEGLRKFRDTIELNDEDIALVKQAVAQCPNLLEIKGSFRARFYGLAYKTLAELLHFLNTESALTITQEHEQMFQMMCDETIQFGFDRKWVEEMRKCVARDPEVDRAQKRLKELRQEMDTLEKNLLDRNKCFRSM 1833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00287 1833 SUPERFAMILY L domain-like 1084 1415 - -
Bva11g00287 1833 SMART AAA_5 172 323 IPR003593 -
Bva11g00287 1833 Coils Coil 1802 1829 - -
Bva11g00287 1833 Gene3D - 405 490 IPR036388 -
Bva11g00287 1833 Gene3D Ribonuclease Inhibitor 1131 1419 IPR032675 -
Bva11g00287 1833 Coils Coil 230 250 - -
Bva11g00287 1833 Coils Coil 33 53 - -
Bva11g00287 1833 CDD RecA-like_NTPases 175 260 - -
Bva11g00287 1833 PANTHER - 1283 1431 - -
Bva11g00287 1833 PANTHER - 1055 1286 - -
Bva11g00287 1833 SUPERFAMILY L domain-like 497 1058 - -
Bva11g00287 1833 Coils Coil 107 127 - -
Bva11g00287 1833 PANTHER RPP4C3 1055 1286 - -
Bva11g00287 1833 PANTHER - 23 1032 - -
Bva11g00287 1833 Gene3D Ribonuclease Inhibitor 492 701 IPR032675 -
Bva11g00287 1833 PRINTS Disease resistance protein signature 356 370 - -
Bva11g00287 1833 PRINTS Disease resistance protein signature 175 190 - -
Bva11g00287 1833 PRINTS Disease resistance protein signature 628 644 - -
Bva11g00287 1833 PRINTS Disease resistance protein signature 247 261 - -
Bva11g00287 1833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 420 IPR027417 -
Bva11g00287 1833 Gene3D - 321 404 IPR042197 -
Bva11g00287 1833 Gene3D - 137 317 IPR027417 -
Bva11g00287 1833 Pfam NB-ARC domain 160 405 IPR002182 GO:0043531
Bva11g00287 1833 PANTHER RPP4C3 1283 1431 - -
Bva11g00287 1833 PANTHER RPP4C3 23 1032 - -
Bva11g00287 1833 Gene3D Ribonuclease Inhibitor 757 1115 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00287 Bva-Chr11 6551033 6560323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00287 176 650 WRKY Transcription Factor Family AT5G45050 20.926 2.62e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00287 - - tcc:18599407 816.609