Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00279 ATGGAGTGTCTAACCATGGTAGGTGAGAAAATACTGGAATACACATTGGACCCAATGGCGCGACAAGTTGGTTATCTGATATTCTACAACAGCAATGTGAAGGAATTGAAGGAGAAAGCTGAGACTCTACAGCATGCGAGAGAAAGTGTGCAACAAAGAGTTGATGCTGCCTATAGAAATGGAGATGAGATTTACAATGGCGTTCGCACGTGGCTAGAAAAAGTAGATGAAATGGCGATAAAGGTGGAGGGTCATATTCAAGATGATCACCACAAGAAGACAGGGTGCTCTAGCAGATCATTTCCTAATCTTTGGGTGAGACATCAGTTAAGCAGGATGTCAAAGAAGATGGTGCAAAAGATTGAAATCCTCAAGAATGAGGGACAGTTTGAGCATGTCTCTTATCAGAAAGCTCCTAATTTAATAGAGAACCTTTCATCAGCCGTGGGTGTCGAGGACTTTGGATCAAGGGTTGAAACACTTGAAGCCATTATGGAGGCATTGAGAGATCCAAATGTGAATAACATCGGAGTACATGGGATGGGCGGTGTGGGAAAGTCCATGTTAGTCAAACAGGTTGCACAGAAAGCTCAACAAGAGTTTGATGTGGTAGTCATGGCAACTATAACACAGAATCCAGAAGTGGAGAAAATCCAGGGGCAAATTGCTGACATGTTGGGACTCCATTTTAGTAATGAGCAAAGTTCAATTGGAAGAGCAGGTCGTCTTCATGAGagactaaaaaaagaaaaaaatgttttgttaatTCTAGATGACCTCTGGGGAGAGCTTAATTGGGGTGAGATTGGCATCCCTTTCCCAGAGGAGCATACGGacaacaataagaaaataagcatCTCTTCTGAAATTCAACAAAGGAGTTGCAAATTCTTAATGACCTCTAGGAATCGGGGTGTTTTGTCAAAATTGAATTCCCAAAAGTATTTTATGGTGAGGCCACTGTCGAATATTGAGGCTTGGAAGCTGTTCAAGAAAAAGGCTATGCTTGATGAGTCTATTGGCAATGCTGAATTGCTTTCTATAGCACATAAAGTTGCTAAAGAGTGTGGTGGTTTGCCACTTGCTCTTGTAACTATTGCAAGTTCATTAAAGAACAAGGAAAAATCAGAATGGAAGGTTGTCTTGCAAGAACTAAGAGATCCTGCTCCAACAGGTATACAGAATGCTATATATAAACGAATTGAAGTGAGttaccaaaatttaaaagatgataTCCTCCAGTCACTTTTCCTGCTTTGTGGAATGTTTGGACATGTTTTAACTAGTGATTTGTTCAAGTATTCTGTTGGactgaatttatttaaacacattcccaaaatagaatatgctcgaaataaatttgattcatGTATTCATAAACTAAAAGACTCATGCTTGTTATTAGATGAAGATAGTTCTAATAAACATTGCAAAATTCATGATGTTGTCCGAGATGTGGCTTTAAGAATAGCATTACAGCATCAACAatgttttgtgaaaataaatgaactttTGGAAGAATGGCCTGAGGAAGAGCAAACTAAAAATTGCAAGACAATTATATTACAGTTCTGTTATTTAGATGACCTTGAAAGGCTATGTTGTCCCAacctcacattttttttaataaacactAGAAACCCCTCTTTAAAACTATCAGACAACCTTTTCGAAGGAATGCCTAGACTCAAAGTACTAGATTTGACAAGGATGAAATTTGAGTCCTTACCTTCATCGATTAGTCTCTTGAGCAACTTACGTACCTTGTGTCTTGATATATGTTCTTTGGGGAAAATAGAGGTCATTGGAGAGTTGAAGCATTTAAAAGTCCTCAGCCTTTCAAAATCTGATATTAAACAATTGCCCCAAGAACTAGGGCAATTGACCCAGCTGCAATTGCTGGACTTGACTGGTTGTTCTCAACTAAAGTTAATACCACGCAATATCCTGTCAAGCCTGAAAAAGTTGGAGAAGCTGTACATGCAAGACAGTTTTGCGAACTGGGATGTGAATGATCCAATGGACCAGCAGCAAATAAATGCTAGTGTTTCTGAACTAGACAATTTGCCTCTCTTGACCACATTAGAAGTTCATATTCCTGATGAGAGAATGTTGCCAAAAGTCCTGACCTTTGAAAGACTTCAAAAGTACAAAATACTTATAGGAAATGTCTGGGATTGGTCTTCTGAGACAGAAACTTCAAGGATCCTGAAGCTTTGGCTTAGCACTAACATTCACTTGAGAGATGATATCAAAAGACTGCTTGATACTGTTGAAGAATTGCACATTGGCAAATTGGAAGGAGCAATGAATGTTCTTCCTGCCCTAAACAATGAAGGTTTACCACAACTACAGCATCTTTATGTCACTGATAATGATGAGATTCAGTGTGTAATTAACTCATTGGAGGTCATCCAGTCTATTGATCTCTTCCCAAACTTGCAGTCAATGGTTCTCTTAAATGTAATGAACCTTGAAAAGTTATGCAGCGGGTCTCTTACTGGAGAATCCTTTTCCAAACTGAAgattataaaagtgaaaaattgtATTAACTTGAGGAGCCTGTTGCCAGCTTCCATTGCAAGAAGTCTTCCACATCTTGTTGAAATTGAACTTGAGGAATGTTTTCGTATGGAAAGAGTGGTTTATGATGACGAAAAGGCTGCTGGCATACTCCAGTTTCCTAAGTTATGCTCTTTAACAATACGATCTATTCTCTATTACTTGGATTCTATTGTGGAGGCAATGTTCTTGGCACATCGAATGCACTTTTTTGTGAGAAGGTATGCTAACAAACTTTACTCTTCATTCAAATACtttaatactttaatatttgaaacaaGATTTCTTATATG 2855 0.3643 MECLTMVGEKILEYTLDPMARQVGYLIFYNSNVKELKEKAETLQHARESVQQRVDAAYRNGDEIYNGVRTWLEKVDEMAIKVEGHIQDDHHKKTGCSSRSFPNLWVRHQLSRMSKKMVQKIEILKNEGQFEHVSYQKAPNLIENLSSAVGVEDFGSRVETLEAIMEALRDPNVNNIGVHGMGGVGKSMLVKQVAQKAQQEFDVVVMATITQNPEVEKIQGQIADMLGLHFSNEQSSIGRAGRLHERLKKEKNVLLILDDLWGELNWGEIGIPFPEEHTDNNKKISISSEIQQRSCKFLMTSRNRGVLSKLNSQKYFMVRPLSNIEAWKLFKKKAMLDESIGNAELLSIAHKVAKECGGLPLALVTIASSLKNKEKSEWKVVLQELRDPAPTGIQNAIYKRIEVSYQNLKDDILQSLFLLCGMFGHVLTSDLFKYSVGLNLFKHIPKIEYARNKFDSCIHKLKDSCLLLDEDSSNKHCKIHDVVRDVALRIALQHQQCFVKINELLEEWPEEEQTKNCKTIILQFCYLDDLERLCCPNLTFFLINTRNPSLKLSDNLFEGMPRLKVLDLTRMKFESLPSSISLLSNLRTLCLDICSLGKIEVIGELKHLKVLSLSKSDIKQLPQELGQLTQLQLLDLTGCSQLKLIPRNILSSLKKLEKLYMQDSFANWDVNDPMDQQQINASVSELDNLPLLTTLEVHIPDERMLPKVLTFERLQKYKILIGNVWDWSSETETSRILKLWLSTNIHLRDDIKRLLDTVEELHIGKLEGAMNVLPALNNEGLPQLQHLYVTDNDEIQCVINSLEVIQSIDLFPNLQSMVLLNVMNLEKLCSGSLTGESFSKLKIIKVKNCINLRSLLPASIARSLPHLVEIELEECFRMERVVYDDEKAAGILQFPKLCSLTIRSILYYLDSIVEAMFLAHRMHFFVRRYANKLYSSFKYFNTLIFETRFLI 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00279 951 Gene3D Ribonuclease Inhibitor 525 914 IPR032675 -
Bva11g00279 951 PRINTS Disease resistance protein signature 356 370 - -
Bva11g00279 951 PRINTS Disease resistance protein signature 175 190 - -
Bva11g00279 951 PRINTS Disease resistance protein signature 247 261 - -
Bva11g00279 951 PRINTS Disease resistance protein signature 626 642 - -
Bva11g00279 951 SUPERFAMILY L domain-like 479 910 - -
Bva11g00279 951 Pfam NB-ARC domain 160 391 IPR002182 GO:0043531
Bva11g00279 951 Gene3D - 140 318 IPR027417 -
Bva11g00279 951 Coils Coil 26 60 - -
Bva11g00279 951 PANTHER - 7 886 - -
Bva11g00279 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 420 IPR027417 -
Bva11g00279 951 Gene3D - 321 409 IPR042197 -
Bva11g00279 951 PANTHER PHOSPHATASE, PUTATIVE-RELATED 7 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00279 Bva-Chr11 6374409 6377264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00279 172 646 WRKY Transcription Factor Family AT5G45050 22.264 2.89e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00279 - - minc:123209058 659.448