Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00276 ATGGAATCTTTCgttcactttcttcttcttttcttacgCATTTTTAAATCAGAGATGGGACCGATAGTGGCTGAAGCTAGGAGCTGTGATTCTCCAAGCCACCGCTTCAAGGGAATATGTCTGAGTAGCAGGAACTGTGCCTCTGTTTGCCAAACAGAGGGTTTCCCCAGAGGAAATTGCCGAGGCTTCCGGCGCCGGTGCTTGTGCTCTAAACCTTGTTA 221 0.4389 MESFVHFLLLFLRIFKSEMGPIVAEARSCDSPSHRFKGICLSSRNCASVCQTEGFPRGNCRGFRRRCLCSKPC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00276 73 CDD Knot1 38 69 IPR003614 GO:0006952
Bva11g00276 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Bva11g00276 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Bva11g00276 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Bva11g00276 73 Gene3D - 27 73 IPR036574 -
Bva11g00276 73 SMART gth_4 28 73 IPR003614 GO:0006952
Bva11g00276 73 Pfam Gamma-thionin family 27 73 - -
Bva11g00276 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Bva11g00276 73 PANTHER DEFENSIN-LIKE PROTEIN 1 1 73 - -
Bva11g00276 73 PANTHER DEFENSIN-LIKE PROTEIN P322 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00276 Bva-Chr11 6311602 6311823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00276 8 73 Plant Defensins Gene Families AT2G02100 57.576 3.76e-26 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00276 - - nnu:104606994 106.301