Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00275 ATGGCTTCCTCTAGGCACTtcttttcctccatttttcttctcctaaTTCTTGTTGCCACAGTTACAATTGTGATCTCAGGGATGAGTCCAGTGGTGGCTGAAGATAGGATTTGTGAGACTCTAAGCGAAAGCTTCACGGGGCTATGCTTAAGTGACGGTAACTGCGCTTCTCTTTGCCAAACGGAGGGTTTCTCTAGTGGCCATTGCTCTGGATTCCGCCGTCGATGCTTCTGCACCAAACCCTGTGTTta 251 0.4422 MASSRHFFSSIFLLLILVATVTIVISGMSPVVAEDRICETLSESFTGLCLSDGNCASLCQTEGFSSGHCSGFRRRCFCTKPCV 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00275 83 PANTHER DEFENSIN-LIKE PROTEIN 1 1 82 - -
Bva11g00275 83 CDD Knot1 47 79 IPR003614 GO:0006952
Bva11g00275 83 PANTHER DEFENSIN-LIKE PROTEIN P322 1 82 - -
Bva11g00275 83 SUPERFAMILY Scorpion toxin-like 36 82 IPR036574 -
Bva11g00275 83 Gene3D - 36 82 IPR036574 -
Bva11g00275 83 SMART gth_4 37 82 IPR003614 GO:0006952
Bva11g00275 83 Pfam Gamma-thionin family 36 82 - -
Bva11g00275 83 PRINTS Purothionin signature 37 52 IPR008176 GO:0006952
Bva11g00275 83 PRINTS Purothionin signature 67 81 IPR008176 GO:0006952
Bva11g00275 83 ProSitePatterns Gamma-thionins family signature. 36 59 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00275 Bva-Chr11 6299822 6300168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00275 1 82 Plant Defensins Gene Families AT1G61070 50.000 6.66e-22 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00275 - - cmax:111487651 95.1301