Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00260 ATGGAAAGTGGGTTTGAGGTACAACAACATAAGAAGACTCGTGTTTGGCTTGGCACTTTTACTCACGCAGAGATAGCAACTACAGCTTATGATGTTGCTGCTTTGGCTTTTAGGGGAGATTTTGCTCCATTGAACTTCCCAAATGCAGCAACCTCCTTGCCACGCCTTGACTCTCACAAACCTATTCCATTAGAGCAATTTAATTCGCTGCTGAGGAAGCAACTGAGAAgtacttttcttta 242 0.4174 MESGFEVQQHKKTRVWLGTFTHAEIATTAYDVAALAFRGDFAPLNFPNAATSLPRLDSHKPIPLEQFNSLLRKQLRSTFL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00260 80 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 8 59 - -
Bva11g00260 80 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 59 - -
Bva11g00260 80 Gene3D AP2/ERF domain 2 49 IPR036955 GO:0003700|GO:0006355
Bva11g00260 80 SUPERFAMILY DNA-binding domain 9 48 IPR016177 GO:0003677
Bva11g00260 80 SMART rav1_2 2 53 IPR001471 GO:0003700|GO:0006355
Bva11g00260 80 CDD AP2 11 49 IPR001471 GO:0003700|GO:0006355
Bva11g00260 80 ProSiteProfiles AP2/ERF domain profile. 1 47 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00260 Bva-Chr11 6037991 6038233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00260 6 61 AP2-EREBP Transcription Factor Family AT2G36450 52.632 2.52e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00260 - K09286 aprc:113870892 78.9517