Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00258 ATGGCCGATTATGGTGATTTTGCACCAACCGAAGCTCTAGCCGATCTCATTCCCCCCGTTGATTACAGTGCTCCAATTGAGGAGTGGCCATTGCTACTAGtgaagttgaccaagttcaactGTGGTGGTCTCTGCATTGGCATAGCCGTTTCTCACATTGTGGGTGACGGGTGGACCTGGCTTCGGTTCATTAGATCGTGGGCAAAGCTCGCTCGAGGAGAAAATTTGCAGCAAGATGAAATTCCTCTCCATGATCGCAGGTTTGTATTTACATCAATTAAAGAATCTATGAGCTCAAATTTTGATCATAGAGAATACCAGCCACCACCTGTGGTTTTAGGCCTTACTACCGCTGTAGATGAgataaaaaaggaaagcacCGCTGCAATATTTCGCCTCACACCAGAGCAAGTGAAGAAACTGCAGAAGAAAGCCAATGAAGGGTTGAATCAAGATCGACCCTTTAGCAGATATGAAGCCATAGCTGGTCACATCTGGAAATGTGCATGCATGGCTCGCTTGCAAGATGACAGAAACAGCCACCAGCCCACAGTGATTCGAACCGTGGCGAGTATTCGAAACAGATTGAAGCCATTCATTCCTTTGAACTATGCAGGGAATGCAATTCTAACTACATTGACAACAACTTGCTTCTTCAAAGATCTCTTGTCCAACCCTTTGAGCTATGCCGCAAAGAAAATCAGGGAAGCCATTGAATCAATGACAGATGAATATTGTTGGTCGATTATGGATTGGCTGAGCCAAAACGAGATTGGGAGTGAAGAAGTAGAGTTCTTCTATGGAAACCCTAACTTTAATATTGGAAGCTGGACTACGCTACCTGTGTATGATGCAGATTTTGGGTGGGGGAATCCAGTGTACATGGGTCCAGCAAAGCTTAGTTGCGGAAAGGCCATCATCATGCCAAGCCCCAGTAATGATGGTTCACTTCTGATAGCCTTGCGTTTCGAAACGAGGCACTTTCAAGATTTTGAAGACTTCCTCTACCAAAGCATTTA 1019 0.4357 MADYGDFAPTEALADLIPPVDYSAPIEEWPLLLVKLTKFNCGGLCIGIAVSHIVGDGWTWLRFIRSWAKLARGENLQQDEIPLHDRRFVFTSIKESMSSNFDHREYQPPPVVLGLTTAVDEIKKESTAAIFRLTPEQVKKLQKKANEGLNQDRPFSRYEAIAGHIWKCACMARLQDDRNSHQPTVIRTVASIRNRLKPFIPLNYAGNAILTTLTTTCFFKDLLSNPLSYAAKKIREAIESMTDEYCWSIMDWLSQNEIGSEEVEFFYGNPNFNIGSWTTLPVYDADFGWGNPVYMGPAKLSCGKAIIMPSPSNDGSLLIALRFETRHFQDFEDFLYQSI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00258 339 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 338 - -
Bva11g00258 339 Pfam Transferase family 3 333 - -
Bva11g00258 339 Gene3D - 116 338 IPR023213 -
Bva11g00258 339 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 2 338 - -
Bva11g00258 339 Gene3D - 1 108 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00258 Bva-Chr11 6018138 6019157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00258 3 337 Monolignol Biosynthesis Gene Families AT5G48930 38.938 1.10e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00258 K13065 - qsu:112015385 351.673