Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00254 ATGAGCTCTAACAGAATTCAAGGGACACTTCCTTCTACCATCACTCACTTGACTGAGCTCCATGTGCTCGACTTATCTTTTAACAATATTATAAGTCAAATTCCTACAGATATTGACCTCTTGACAAAGCTTGAAGTCCTCAAATTGGGAAAGAATAACTTTTATGGTATTATCCCTCCATCTCTAGGAAACATTTCATCTCTCACAAACATCAGTTTTGGCACAAACATTCTTAGTGGTAAGATTCCAAATGATTTGGGTCGGCTCAAGAATCTTGTTGAGCTTGATCTCACAATCAACAAACTCACTGGGACTGTTCCACCATCTTTATATAACTTATCTTCCCTCATTAGTTTTGCGCTAGCTGCCAACGACTTGTGGGGTGAGTTTCCTAAGGATGTTGGTGATAGGCTTCCTAAGCTCCTTGTGTTCAATATGTGCTTCAATAGATTCACGGGTAGAATTCCTGGATCCTTGCACAATCTCACCAACATTAGAGTTATTAAAATGGCTGACAACTTACTGCTTGGAACTGTACCACCAGGTCTGGGGAATCTCCCTTTCCttgaaatgtataaaatagGATTTAATAAGATTGTCAGCTCAGGTTATAGAGGTCTTGAGTTCCTTAGCGCTTTAACAAACAGCACACGGTTGCACCTCCTTGCAATCGATGGCAATCAACTAGAAGGTGTAATTCCAGAGAAAATTGGCAATCTATCCAAGGTTCTGTCAATATTATACATGGGACAGAATAAAATCTATGGCACCATACCAGCCTCTATTGGTCAACTTAGTAGCTTGAGATTGTTAAATTTGAGCTTCAATTCCATCTCAGGAGGAATCCCATCCGAATTAGGCAAATTGCAGGAACTGCAAGAGCTTAATTTGGCTGGAAATCAGATATCAGGAAGTATTCCAAAATCATTTAGTAGTCTTCGAAAGTTAATCCGAATTGATTTGTCAGGCAATGAAATATCTGGTAAAATACCTGTTAGTCTTAAGAATTTAGAAAACCTTCTTTCAATGGACTTATCTAATAACAAGCTCAAGGGAAGCATACCCAAAGAAATACTCCATCTCTCAACTCTAAGCATTGCTTTGAATTTGTCCAAGAACTTCTTAAGTGGATCCTTATCTGATGAAATTGGGAGTTTGGTTAGTCTTACTACTATGGACTTCTCCGACAACCATTTCTCTGGCAAGCTTCCTAGTTCAATCAAACACTGTTCGAGCTTGGAAAATCTATTCTTGGCCAGAAATAAGTTTTCCGGATCCATTCCACAAATTCTTGCACAAGTGAGAGGTTTGGTAAATTTGGACCTATCCTCTAACAATTTCTCTGGCATCATTCCAATAGAACTTGGAAACCTTAAGGCCCTTCAGTTCTTGAACCTCTCTTACAATGATTTAGAGGGAGAAATTCCCAGTGCTGGGGTTTTCCAGAATCTTTCTGCTGTCCATTTAGAAGGAAACAAGAAACTTTGTTTTCACTTCTTGTGTTCTTCTCAAGACCACAGAAGAAAGCCCAGCAACATTCTTTTGGATGAGGACATGACAGCTAAGATAGGAGACTTTGGATTGGCTAGGATGTTGATTGAAAGATCAAGTGGTGAAGTCTCAATTAGCTCTACTCATGTTCTAAGAGGTTCAATTGGCTACATACCTCCAGAATATGGCTGGGGAGGGAAACTATCAATAGCTGGAGATGTATATAGTTTTGGAATTGTGTTGTTAGAGCTCTTCACTGGAAAAAGTCCAACAAATGATTGCTTCACAGTAGGCATAAACCTAACAAGTTGGGTAAAGTCTGCATTCCCACACAAGGTTGAGCAAGTCATAGATCCACAATTCCTAACATGTCAAGATATGAATGCTACTTCTGCTCATGTGAAAGCAAAATATCCAAatcttcaatttaattgtcTATCTGCAATTCTTCAAGTTGGGCTATCTTGCACTGCTGATTTTCCAGATGAACGCATTAACGTGAAAGAGATCGTTCGCAAATTGGAAGCTTCCAAAGAGATTCTATTGAAGGCAACCAAGATTTATGGTCCAGCAGAGCAtta 2072 0.388 MSSNRIQGTLPSTITHLTELHVLDLSFNNIISQIPTDIDLLTKLEVLKLGKNNFYGIIPPSLGNISSLTNISFGTNILSGKIPNDLGRLKNLVELDLTINKLTGTVPPSLYNLSSLISFALAANDLWGEFPKDVGDRLPKLLVFNMCFNRFTGRIPGSLHNLTNIRVIKMADNLLLGTVPPGLGNLPFLEMYKIGFNKIVSSGYRGLEFLSALTNSTRLHLLAIDGNQLEGVIPEKIGNLSKVLSILYMGQNKIYGTIPASIGQLSSLRLLNLSFNSISGGIPSELGKLQELQELNLAGNQISGSIPKSFSSLRKLIRIDLSGNEISGKIPVSLKNLENLLSMDLSNNKLKGSIPKEILHLSTLSIALNLSKNFLSGSLSDEIGSLVSLTTMDFSDNHFSGKLPSSIKHCSSLENLFLARNKFSGSIPQILAQVRGLVNLDLSSNNFSGIIPIELGNLKALQFLNLSYNDLEGEIPSAGVFQNLSAVHLEGNKKLCFHFLCSSQDHRRKPSNILLDEDMTAKIGDFGLARMLIERSSGEVSISSTHVLRGSIGYIPPEYGWGGKLSIAGDVYSFGIVLLELFTGKSPTNDCFTVGINLTSWVKSAFPHKVEQVIDPQFLTCQDMNATSAHVKAKYPNLQFNCLSAILQVGLSCTADFPDERINVKEIVRKLEASKEILLKATKIYGPAEH 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00254 690 PANTHER OS04G0122200 PROTEIN 509 676 - -
Bva11g00254 690 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 509 - -
Bva11g00254 690 SMART LRR_sd22_2 241 267 - -
Bva11g00254 690 SMART LRR_sd22_2 89 115 - -
Bva11g00254 690 SMART LRR_sd22_2 17 36 - -
Bva11g00254 690 SMART LRR_sd22_2 289 310 - -
Bva11g00254 690 SMART LRR_sd22_2 313 339 - -
Bva11g00254 690 Gene3D Transferase(Phosphotransferase) domain 1 505 683 - -
Bva11g00254 690 Pfam Leucine rich repeat 412 471 IPR001611 GO:0005515
Bva11g00254 690 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Bva11g00254 690 SMART LRR_typ_2 289 312 IPR003591 -
Bva11g00254 690 SMART LRR_typ_2 17 40 IPR003591 -
Bva11g00254 690 SMART LRR_typ_2 265 288 IPR003591 -
Bva11g00254 690 SMART LRR_typ_2 89 113 IPR003591 -
Bva11g00254 690 SMART LRR_typ_2 337 361 IPR003591 -
Bva11g00254 690 SMART LRR_typ_2 458 483 IPR003591 -
Bva11g00254 690 SMART LRR_typ_2 41 65 IPR003591 -
Bva11g00254 690 SUPERFAMILY L domain-like 243 496 - -
Bva11g00254 690 ProSiteProfiles Leucine-rich repeat profile. 19 41 IPR001611 GO:0005515
Bva11g00254 690 PANTHER OS04G0122200 PROTEIN 1 509 - -
Bva11g00254 690 ProSiteProfiles Protein kinase domain profile. 292 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00254 690 SMART serkin_6 413 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00254 690 Gene3D Ribonuclease Inhibitor 208 504 IPR032675 -
Bva11g00254 690 SUPERFAMILY Protein kinase-like (PK-like) 509 674 IPR011009 -
Bva11g00254 690 Pfam Protein tyrosine and serine/threonine kinase 511 671 IPR001245 GO:0004672|GO:0006468
Bva11g00254 690 Pfam Leucine Rich Repeat 267 289 IPR001611 GO:0005515
Bva11g00254 690 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 509 676 - -
Bva11g00254 690 Gene3D Ribonuclease Inhibitor 1 207 IPR032675 -
Bva11g00254 690 SUPERFAMILY L domain-like 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00254 Bva-Chr11 5970220 5973686 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00254 509 671 Receptor kinase-like Gene Family AT5G20480 43.030 1.82e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva11g00254 PK_Tyr_Ser-Thr 2.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00254 - - gmx:100783512 672.544