Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00185 ATGCTCCAAATAATTGGAGTAGAAGTTCGTTGGAGCTACTATTGTGGTGTGCTTTATAATCACACTGACTTAGGACTTGTCATGGGACAAGTGACTGGACATTATATTCTACCGTACTTTGCAGCCAGATTTCTTCTTGGAatcacatttttgttttggttgttGACGTATACTTGGAGAAGAAGACATATTTCTGTTTATGGAGATATTGAAGAATTTTTGCAAGTTAACAACCTTATGCCAATTAGGTACTCATACAACGAGATAAAGAAGATGACTAGAGGTTTTAGAGACAAACTGGGTGAAGGAGGCTTTGGCTCTGTATATAAAGGAAAGCTAAGGAGTGGGCCTTTTGTTGCAGTAAAGATGTTGGATAAAGCCAAGGCTAATGGGCAAGAATTCATTAGTGAAGTTGCAACAATTGGAAGGATACACAATGCTAATGTAGTGCAGTTTattggattttgttttgagGGATCAAAATGTGCTCTTATATATGAATTCATGCCTAATGGATCTCTTGATAAATATGTTTTCTCCAAAGAGGTTAGTGTCTTTTTAAGTTATGAGAAAATGTATGCCATATCTATCGGAGTGGCTCGTGGAATTGCTTATCTTCATCAAGGCTGTAACAtgcaaattttgcattttgatatCAAGCCCCATAACATTCTTTTGGATAAAAACTTCATTCCAAAAGTTTCAGACTTTGGACTTGCAAAGTTGTATCCTATTGATGATAGCATTGTCACTTTGACTGCAGCAAGAGGAACAATCGGCTACATGGCTCCTGAATTGTTTTATGACAATATTGGGGGAGTCTCATATAAGGctgatgtttatagttttagaaTGCTATTGATGGAAATGGCAAGCAGGAGGAAGAACTTGAATGTAGATGCAGAGCATTCAAGCCAGCTTTACTTTCCTCTGTGGATTTATGATCAattcaatgaagaaaaagaaatagaaatggaATATACCACTAAGGAGGAAAAAGATATTGCAAAGAAGATGTTCATAGTTGCACTATGGTGTATACAATTGATGCCCTGTAATCGTCCTTCTATGAATGGAGTAGTAGAGATGCTCGAAGGAAATACTGAATCTCTGGAATTGCCCCCAAAGCCTGCTCTATGTCCGCATGAAACAATTGAACAGAATGAGGACTCTTCTTGCCTAAAAGAACCAAGTCCCTTAACTAATTCCAACACTTATCTCCAGGAAATTGCAACTGTTCCTTCACTGGAAAATTCTGCATA 1262 0.351 MLQIIGVEVRWSYYCGVLYNHTDLGLVMGQVTGHYILPYFAARFLLGITFLFWLLTYTWRRRHISVYGDIEEFLQVNNLMPIRYSYNEIKKMTRGFRDKLGEGGFGSVYKGKLRSGPFVAVKMLDKAKANGQEFISEVATIGRIHNANVVQFIGFCFEGSKCALIYEFMPNGSLDKYVFSKEVSVFLSYEKMYAISIGVARGIAYLHQGCNMQILHFDIKPHNILLDKNFIPKVSDFGLAKLYPIDDSIVTLTAARGTIGYMAPELFYDNIGGVSYKADVYSFRMLLMEMASRRKNLNVDAEHSSQLYFPLWIYDQFNEEKEIEMEYTTKEEKDIAKKMFIVALWCIQLMPCNRPSMNGVVEMLEGNTESLELPPKPALCPHETIEQNEDSSCLKEPSPLTNSNTYLQEIATVPSLENSA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00185 420 SMART serkin_6 94 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00185 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Bva11g00185 420 Gene3D Transferase(Phosphotransferase) domain 1 169 373 - -
Bva11g00185 420 Pfam Protein tyrosine and serine/threonine kinase 97 364 IPR001245 GO:0004672|GO:0006468
Bva11g00185 420 Gene3D Phosphorylase Kinase; domain 1 69 168 - -
Bva11g00185 420 ProSiteProfiles Protein kinase domain profile. 94 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00185 420 ProSitePatterns Protein kinases ATP-binding region signature. 100 122 IPR017441 GO:0005524
Bva11g00185 420 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 395 IPR045874 GO:0004672
Bva11g00185 420 SUPERFAMILY Protein kinase-like (PK-like) 79 365 IPR011009 -
Bva11g00185 420 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 4 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00185 Bva-Chr11 4474322 4475584 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00185 83 413 Receptor kinase-like Gene Family AT5G38280 48.246 6.45e-106 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bva11g00185 PK_Tyr_Ser-Thr 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00185 - - gmx:100305367 560.066