Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00183 ATGATTTCGCATCCTTACCACTCCATGCTGGTTGCCCTATTGGTTCTGCTAATGAATCTATGGTGCGGTTACAGTGATTGCCAGGAATATAGATGTGGGGATGATGGCCCTCCTATTCGATTTCCCTTCCATCTCATCCACGGCAAGACTGATCAACCTGGCTATCCCGAAGGCTTTGGTCTAGCTTGCACGGATAAAGATCAGACAATCCTTGAGCTCTCAAATATAACATTCTTAGTcgatcaaataaattatcattatcaataTGTATACCTAAGGAACCCTGAAAATTGCCCTGCCATGCAATTCCTAAACATCAAccactcttcaatttttcctcCCCAATTTGATGTTGAAAACCATTACCTTACTTTCTTCAACTGTTCTTCACTAGaacaacaaaaacagaaaagccTATACACATGGAATTCATCTGACCAAGATCCGTTCTGCCCAATTTATGTCGCCGATTCCTTCAATGATATCGTTTACATGGACGTAGTATCTTGCATTAAGATATTTGATGTTACAATAGACCTGCCTTACAACTTCTTCATTTATAATAGCAGCATATTATTGCAATGGTCAAAACCAAATTGTAGCATGTGCGAATCGCAAGGACTGCACTGCAAACTGAAAAACAATTGGTCTGATGATGAAATTGAGTGTTTCACTTGCCATACAAGCAGGACTCCTACATCAAGGATTCTAATTGCTGCAGGTGTAATAGGTTCAGTCCTTTTGGTGCTATCGGTCTTTGCGTTGTTTCACATctataattgttataaaacaaaaggcGAAGATCAGGCAAGagtggaaatttttttggagGATTACAAGTCTCAAAAGCCTACAAGATTCTCATTTGTTGATATTAAGAGAATCACTAATGGTTTTAAGGAAAAGTTGGGTGAAGGAGCTCATAGAGCTGTCTTCAAAGGTAAGTTGTCTGAAGAAATTATTGTGGCTTTGAAGACACTCAATAATACAGAAGGAGATGGGAAAGAATTCATCAACGAAGTGGGAACTATGGGGAAAATCCATCATGTCAATGTGGTTCGCTTGCTTGGCTTTATGTGCTG 1082 0.3623 MISHPYHSMLVALLVLLMNLWCGYSDCQEYRCGDDGPPIRFPFHLIHGKTDQPGYPEGFGLACTDKDQTILELSNITFLVDQINYHYQYVYLRNPENCPAMQFLNINHSSIFPPQFDVENHYLTFFNCSSLEQQKQKSLYTWNSSDQDPFCPIYVADSFNDIVYMDVVSCIKIFDVTIDLPYNFFIYNSSILLQWSKPNCSMCESQGLHCKLKNNWSDDEIECFTCHTSRTPTSRILIAAGVIGSVLLVLSVFALFHIYNCYKTKGEDQARVEIFLEDYKSQKPTRFSFVDIKRITNGFKEKLGEGAHRAVFKGKLSEEIIVALKTLNNTEGDGKEFINEVGTMGKIHHVNVVRLLGFMC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00183 360 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 359 IPR045874 GO:0004672
Bva11g00183 360 PANTHER RECEPTOR-LIKE KINASE 23 359 - -
Bva11g00183 360 Pfam Wall-associated receptor kinase galacturonan-binding 27 92 IPR025287 GO:0030247
Bva11g00183 360 Gene3D Phosphorylase Kinase; domain 1 271 360 - -
Bva11g00183 360 ProSiteProfiles Protein kinase domain profile. 297 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00183 360 Pfam Protein tyrosine and serine/threonine kinase 299 359 IPR001245 GO:0004672|GO:0006468
Bva11g00183 360 SUPERFAMILY Protein kinase-like (PK-like) 279 359 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00183 Bva-Chr11 4456878 4458062 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00183 261 358 Receptor kinase-like Gene Family AT1G66980 40.404 1.40e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bva11g00183 GUB_WAK_bind 9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00183 - - gmx:100811907 319.701