Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00175 atgaagagaagaaaactaaAGCAGACAACACCTTCTGAACAGCTAAAGCCACAGCAGCAATTGGTCTCCTATGATGAACTTCGTTTGGCAACTGGGAATTTCAGCCAGGAAAATTTAATAGGAAGTGGAAGCTTTGGCTCGGAATTTCTTGCTCTAGTTTATGAGTTCCTGTCTAATGGAAGCTTGGAAGATTGGATAAAAGGGACAAGGAAGCATGCAAATGGAAAGGAGTTGAATCTTATGGAGAGACTGAATATGTCTATTGATGTTGCTTATGCGTTACAATACCTTCATTATGACAATGAAATTCCCATTGTGCATTGTGATTTGAAACCCAACAACATTCTTTTGGATAAAGACATGACAGCTAAGATAGGAGACTTCGGATTAGCTAGGATGTTGATTGAAAGATCAAGTGGTCAAGTCTCAATTGGTTACATACCTCCAGATGCCATTTATGATCATTTGAATGCAAAAAATCCAAATCTCCAACTTGATTGTCTATCTACAATTCTTCAAGTTGGGCTATCCTGCACTGCGGATTTTCCACAAGAACGCATTAGCATCAGGGACGTTGTTCGCAAATTGGAAGCTTCCAAAGAGATTCTATTGAAGGCAGCCAAGATTTATAGGCCTTCCAACCATTACTATTA 653 0.3828 MKRRKLKQTTPSEQLKPQQQLVSYDELRLATGNFSQENLIGSGSFGSEFLALVYEFLSNGSLEDWIKGTRKHANGKELNLMERLNMSIDVAYALQYLHYDNEIPIVHCDLKPNNILLDKDMTAKIGDFGLARMLIERSSGQVSIGYIPPDAIYDHLNAKNPNLQLDCLSTILQVGLSCTADFPQERISIRDVVRKLEASKEILLKAAKIYRPSNHYY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00175 217 PANTHER OS04G0122200 PROTEIN 6 47 - -
Bva11g00175 217 SUPERFAMILY Protein kinase-like (PK-like) 10 197 IPR011009 -
Bva11g00175 217 Pfam Protein kinase domain 48 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00175 217 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 48 149 - -
Bva11g00175 217 Gene3D Transferase(Phosphotransferase) domain 1 35 203 - -
Bva11g00175 217 PANTHER OS04G0122200 PROTEIN 48 149 - -
Bva11g00175 217 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 6 47 - -
Bva11g00175 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Bva11g00175 217 ProSiteProfiles Protein kinase domain profile. 1 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00175 217 SMART serkin_6 34 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00175 Bva-Chr11 4184156 4185918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00175 46 211 Receptor kinase-like Gene Family AT3G47090 31.646 6.65e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva11g00175 Pkinase 7.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00175 - - aprc:113860022 181.03