Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00122 ATGTTGACGAATTGCCATGAAAATTGCAAGCCAATTGCTATGATGATTATTGTTAAGTTAGCTCTGGCTTTTGTCAATCTCCTTATGAAGAAGGTTCTTAATGAAGGAATGAGCTACTTGACTATCATAGCTTATCGACAGGCAATTTCAGCTATTTTCTTAGCACCTATTGCCTGCCTCTATGAAAGGAAAAACAAACTGGAGATTCACATAATCTGTCTTCTTTTCCTCAGTGCTCTTGTTGGTGTAACACTCACTCAATACCTATTCCTTCTGGGACTGAAGTATACATCTGCCACATTCTCATGTGCATTCCTCAATATGGTGCCTGTATTTACATTCATCATGGCTCTACCATTTGGCATAGAGAAGGTGTACATGAAAAGCAAGAGCGGAAAAGCCAAGGTCTTGGGTACTTGTGTGAGCATTAGTGGAGCTTTATTGTTGATTTCTTACAAGGGAATGCCCTTAATTAACCCTCAATCTCACCATACCAAAAATAAAGCTACAAGCATACCATCAGACCATAAGTTAGAAAAATGGCTTATAGGTTCAATACTTCTGACAGCAGCCAGCCTCTTATGGTCTTCATGGTTCCTTATCCAAGTAAGGATTAGCAAAAGATATCCATGTCAATACTCTAGCACAGccattttgtctctttttagTGCCATTCAATCAGCAATCTTAAGTTTGGTCATTGAGAGACAAAACGCCACGTGGATTCTCAAAGGAAAGATGGAAATAATGAGCGTCATATATGGTGGATTGGTGGGATCAGGCTTGTGTTACGTGGCGATGTCATGGTGTGTCAAACAAAAAGGTCCAGTGTTCACAGCAGCATTTACCCCCCTTATACAGATATTTGTGGCAGTGCTAGATTTCTCTATATTACAAGAGGAAATTTACCTGGGCAGGCTTCCAACCAGAGTTCTGAACAAAAAAACCCCATTTGAAGGCTGGTTTGGGTACAAACCAGATTTACAAAATCTAGAAATCTTTGGCTGTGTTTGTTTCTCTTATGTTCCGCAAGTTAAAAGGGACAAACTTGATAAAAAGGCAGAACCTGGAGTCTTCATTGGATATAGCAACACTTCCAAAGCTTACAGAATTTTCCAAccacaaaatggaaaaattcttGTAAGTAGAGATGTCAAATTCATGGAAGACCAGCAATGGAGCTGGGAGAAACCAATCATGAAGCAGCTGCCAGAAATCCCACAACTCTTTGATGatgatgttgatgatattcCTGTCAGAGGTACAAGATCTTTATCTGAGATTTATCAACTGAGTAATGTGGCTATCTTAGAACCTGCAGAATTTGAAGAAGTTGAGAAGGATGAGAAGTGGATAAATGCTATGAAGGAAGAACTGAAGATGATCGAAAAAAATGACACTTGGGAGCTATACATCCGCCACAAAGCTGAGTGGTCAATTGTAGGTGCCATGCCACATTTACTAAGGCTCTCAAGAAAATACCACGCTTCCTTTACCAACCCTCCACAAGTGCAGGCAGTCAACAAGCATAATTATGTGATCTCGTCAGAAATGATACCAATTATTTGCATTTCTGTGAATAATTTAGGAGATTCTTTGGCCAACCCAATTGCTGCAAGACCTCCATA 1628 0.387 MLTNCHENCKPIAMMIIVKLALAFVNLLMKKVLNEGMSYLTIIAYRQAISAIFLAPIACLYERKNKLEIHIICLLFLSALVGVTLTQYLFLLGLKYTSATFSCAFLNMVPVFTFIMALPFGIEKVYMKSKSGKAKVLGTCVSISGALLLISYKGMPLINPQSHHTKNKATSIPSDHKLEKWLIGSILLTAASLLWSSWFLIQVRISKRYPCQYSSTAILSLFSAIQSAILSLVIERQNATWILKGKMEIMSVIYGGLVGSGLCYVAMSWCVKQKGPVFTAAFTPLIQIFVAVLDFSILQEEIYLGRLPTRVLNKKTPFEGWFGYKPDLQNLEIFGCVCFSYVPQVKRDKLDKKAEPGVFIGYSNTSKAYRIFQPQNGKILVSRDVKFMEDQQWSWEKPIMKQLPEIPQLFDDDVDDIPVRGTRSLSEIYQLSNVAILEPAEFEEVEKDEKWINAMKEELKMIEKNDTWELYIRHKAEWSIVGAMPHLLRLSRKYHASFTNPPQVQAVNKHNYVISSEMIPIICISVNNLGDSLANPIAARPP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00122 542 PANTHER WAT1-RELATED PROTEIN 10 312 IPR030184 GO:0016021|GO:0022857
Bva11g00122 542 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020|GO:0016021
Bva11g00122 542 Pfam EamA-like transporter family 183 304 IPR000620 GO:0016020|GO:0016021
Bva11g00122 542 PANTHER WAT1-RELATED PROTEIN 10 312 - -
Bva11g00122 542 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00122 Bva-Chr11 3419119 3427408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00122 10 254 Nodulin-like Gene Family AT3G30340 45.344 4.43e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00122 - - gmx:100802053 489.574