Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00117 ATGGGATTGGAGGGAAGCATTCCTGCCCGGATAGCCACCCTCCGGATTGTCGTCCTATCCAACAACAAATTATCAGGTGAGATACCTAGTTCGTTTTCTAATCTAACTCAACTAGTGGAGCTTGATCTTTCTCACAATCGTATCAGTGGTTTCATACCTCCAAAAATAggaaattcaacaaatttgGAGAAACTGGATCTAAGTTCTAACAATTTAAGTGGTCCAATTCCATCCTCTTTAGGAAACTTGAAGCATTTAAATGTTCTTGATCTTAGTGAAAATCATCTAGTTGGCCCAATTCCCTTGTCTTTATATGAACTTACTAATTTGACATCTATTTTCCACCATTCAAATAATAGAGGTGGTTATATACATCCTAATATTGGTAAATTATTCGAGCTTGTGAATTGTGACATTAGTCACAACATGATCACCGGAGGGATACCATCAGAGTTAGGTGGAAAACATCACATTGACATTATTCTTCCTATCACCTCTTTCTTTATCGTTCTATTTGTTGGTGATTTACTGTTTTACCAGTATGCCAACAATGTCTACAGGGCAAAGCTACCCATGGGTAGGATTGTTGCAATTAAGAAACTTCAGAGGATGGAATCTAAAAACCCAACCTTTGCAAAGAGTTTTTGCAATGAGATCAAGATGTTGACAGAAATTCGTCACCGAAACATCGTGAAGCTTCATGGCTTTTGTTTGCACAAAAGGTGTATGTTTTTGATCTACGAATACATAGAAAGAGGCAGTCTATTTTGTGCCTTGAGTAATGATTTTGACGTGCAAGAGTTGAACTGGGGTAAGAGGGTGAATATCATCAAAGGAATAGCACATGCTTTGGCATACATGCATCACGGTTGCACCCCAACTAGTATTCATAGAGACATCACAAGCAACAATGTTTTGTTGAACTCAGAAATGGAAGCTATTGTCTCAGACTTTGGCACAGCTAGATTTCTAGATCCTGACTCTTCCAATCAAACTCTATTAGTTGGCACTTATGGATATGTAGCCCCCATGGCATTGGAAGCTATAATGGGAAAGCATCCAGGTGAGCTAATTTCTTTGTTGTCAAAGCCTAACAGTGTAAATATAATGCTAAAGGAAGTCATAGATCAAAGTCTCCATCTTCCTAAACTTCAAAAGGAAATCCAGGTTGTGATTCTTATGACAACACTAGCATTAGCATGTGTGCAGCAAACACCAAAGCTCCGACCATCAGTGCAAGAAGTGGCTCAACAACTTTCAGTTTCAAAGCCACCTATGATTGTGTCCTTTAATGAGATATCAATTCAGCAATTGATGAATCAAGAAATATATCCTGCGGGCAGCAATTA 1349 0.3818 MGLEGSIPARIATLRIVVLSNNKLSGEIPSSFSNLTQLVELDLSHNRISGFIPPKIGNSTNLEKLDLSSNNLSGPIPSSLGNLKHLNVLDLSENHLVGPIPLSLYELTNLTSIFHHSNNRGGYIHPNIGKLFELVNCDISHNMITGGIPSELGGKHHIDIILPITSFFIVLFVGDLLFYQYANNVYRAKLPMGRIVAIKKLQRMESKNPTFAKSFCNEIKMLTEIRHRNIVKLHGFCLHKRCMFLIYEYIERGSLFCALSNDFDVQELNWGKRVNIIKGIAHALAYMHHGCTPTSIHRDITSNNVLLNSEMEAIVSDFGTARFLDPDSSNQTLLVGTYGYVAPMALEAIMGKHPGELISLLSKPNSVNIMLKEVIDQSLHLPKLQKEIQVVILMTTLALACVQQTPKLRPSVQEVAQQLSVSKPPMIVSFNEISIQQLMNQEIYPAGSN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00117 449 Gene3D Phosphorylase Kinase; domain 1 176 249 - -
Bva11g00117 449 PRINTS Leucine-rich repeat signature 83 96 - -
Bva11g00117 449 PRINTS Leucine-rich repeat signature 38 51 - -
Bva11g00117 449 SUPERFAMILY L domain-like 10 157 - -
Bva11g00117 449 ProSiteProfiles Protein kinase domain profile. 167 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00117 449 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 184 438 - -
Bva11g00117 449 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 153 - -
Bva11g00117 449 SUPERFAMILY Protein kinase-like (PK-like) 184 419 IPR011009 -
Bva11g00117 449 Gene3D Ribonuclease Inhibitor 1 161 IPR032675 -
Bva11g00117 449 Pfam Leucine rich repeat 13 72 IPR001611 GO:0005515
Bva11g00117 449 Gene3D Transferase(Phosphotransferase) domain 1 250 425 - -
Bva11g00117 449 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 184 438 - -
Bva11g00117 449 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 3 153 - -
Bva11g00117 449 Pfam Protein kinase domain 185 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00117 Bva-Chr11 3351817 3353768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00117 3 372 Receptor kinase-like Gene Family AT4G08850 38.009 2.02e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva11g00117 Pkinase 6.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00117 - - adu:107475518 400.979