Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00110 ATGCTTCAGAGACTGGACATTGCCATTGATGTAGCAAGTGCATTGGAGTATCTTCACCATGGTTTCGAAACCCCAATAATTCACTGTGATCTAAAGCCAAGCAATGTGCTGTTGGATGACAAATTGATAGGACATGTTGGAGACTTTGGTTTGGCAAGATCCTTTCCAGAAGCTGCTCGGAATTATTCTGCCCCTCAATCAAGCACAAATGGAGTAAGAGGGACTATTGAGTATGGTATGGGAAATGAGGTGTCAATATCAGGAGATGTGTATAGCTTTGGCATTCTCTGGTTGGAGATATTCACAGGAAAGAGACCAACTGATGAATTGTTTAAAGATGGAATGAATCTTCATATCTATGTAAAGGAAGGTTTGCCAAtgctaataaaaaagattttggatCCGATTCTTCTTAAAGATCTCTACAATCAGAGGAGCCGTGTGGTCGAGGAATGCTTGATCTCAATATTTGAAGTAGGATTATCTTGCTCTGATGAATTACCAAGTGAACGGATGAGAATGGAAGCAGCAGCAGCTCAGCTTATTGctataaagaaaaagcttcTCAGTGGAGAGAAATA 581 0.3838 MLQRLDIAIDVASALEYLHHGFETPIIHCDLKPSNVLLDDKLIGHVGDFGLARSFPEAARNYSAPQSSTNGVRGTIEYGMGNEVSISGDVYSFGILWLEIFTGKRPTDELFKDGMNLHIYVKEGLPMLIKKILDPILLKDLYNQRSRVVEECLISIFEVGLSCSDELPSERMRMEAAAAQLIAIKKKLLSGEK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00110 193 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 189 - -
Bva11g00110 193 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 189 - -
Bva11g00110 193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672|GO:0006468
Bva11g00110 193 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00110 193 Pfam Protein tyrosine and serine/threonine kinase 3 174 IPR001245 GO:0004672|GO:0006468
Bva11g00110 193 SUPERFAMILY Protein kinase-like (PK-like) 3 181 IPR011009 -
Bva11g00110 193 Gene3D Transferase(Phosphotransferase) domain 1 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00110 Bva-Chr11 3287256 3287930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00110 1 193 Receptor kinase-like Gene Family AT3G47110 49.749 2.28e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva11g00110 PK_Tyr_Ser-Thr 1.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00110 - - pop:18100734 247.284