Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00099 ATGTCTCAGACATCCAGGGGCCTGCCTGCTTTCCAGTCTATCAAATCATCACCTTCTGAATTCAAGCTTATGACTAATGCAACTCCGGATCTTCAGGGAAGACAAGATGTTAAATTAGGGAAGAGTGAAGCAATTTCATCAAGTATTCCTGAAAAAGGTGCTCTAGAGAAGGTCTCTGAGAAAGTTCAAGACTGTAATGGTGGCATGGATCTTTTTGATGAGGACTCACCTTATGGTGATAAAACTATATCATTAGAAGACAGGCCCTCAATTGCTGATGGAGATGCAGATTCTGCTCCTCTACCTCTCCCATCAATCTCATCATCGTCTAGGGAACAAAAGTGGAGTGATACAACACCTTATGCAACAAAGAAGAAGCTTCAGTATTGGTTTCAACTACAAAATGGGAAGTGGGAGCTGGGGAAGATAATATCAATATCAGGAACTGAGTCTGTTATTTCATTGCCTGATGGGAAAGTTTTAAAGGTCAAAACTGAAAGTTTGGTATCAGCAAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCTTCTGTGTTATACAATCTGCAATATCGATATGatcaaaatatgatttatACGAAAGCCGGGCCTGTTTTGGTTGCAGTAAACCCCTTTAAGAAAGTTCCTCTTTATGGAATCGATTATATTGAAGCATACAAGTGTAAAGCAATTGAAAGCCCTCATGTATATGCCATCACAGACACAGCCATCCGAGAAATGATACGAGATGAAGTAAATCAATCTATAATCATAAGTGGTGAAAGTGGAGCAGGAAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAAATATTAAAGACCAATCCAATACTAGAAGCTTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATAGAGATTCATTTCAGTGAAACTGGAAAAATATCTGGTGCTAATATTCAAACATTTTTGCTTGAAAAGTCAAGAGTAGTCCAATGCAATGAAGGAGAAAggtcatatcatatattttatcaactaTGTGCTGGTGCGCCAAATTCTCTAAGGGAAAAGCTAAATCTAAAAAGTGTCGAGGACTATAAATATCTGAGACAAAGCAATTGTTATTCAATTTCTGGAGTTAATGACGCAGAAGAATTTTGGATAGTCATGGAAGCACTGGATGTTGTCCACATTGGAAAGGAAGACCAAGAGAATGTGTTTGCAATGCTTGCTGCAGTATTATGGCTTGGAAACATATCTTTTACTGTAAttgataatgaaaatcatGTTCAAGCTGTAGAAGATGAGGGTCTGCACAATGTAGCTAAATTGATTGGCTGTGACATTGAAGATCTCAAGTTGACTTTATCAACTCGAAAAATGAAAGTTGGTAATGATATTATTGTCCAAAAGTTGACGTTATCCCAGgCTATCGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCGTGCCTGTTTGATTGGCTGGTTGAACAAATAAACAACTCACTTGCTGTTGGCAAAAAGCGTACTGGCAGATCAATCAGTATTCTTGACATATATGGCTTTGAATCATTTGATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTACAGCAACACTTTAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATACAAGATGGCATTGACTGGGCTAAAGTTGAATTTGATGACAATCAAGACTGCCTTAATCTGTTTGAAAAGAAACCACTGGGATTATTATCCCTGTTAGATGAGGAATCGACTTTCCCAAATGGCACTGATTTAACATTTGCTAACAAGCTGAAGCAACATTTGAAGTCTAATTCTTGTTTTAGAGGAGAACGAGATAAAGCCTTTACTGTGTGTCATTATGCAGGGGAGGTTATGTATGACACAACTGGATTTCTGGAGAAGAACAGGGACCTGTTGCACTTGGATTCCATTCAACTTCTATCCTCTTGCACATGCCATCTCCCTAAGATATTTGCTTCCCACATGCTTACTCAGACTGAGAAGCCTGTCGTTGGCCCTTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGTTCAATTGTTCCAACTGATGCAACGTTTAGAGAGCACCACATCACATTTTATTCGTTGCATTAAGCCCAATAACCTTCAGTCACCAGGATCATATGAACAAGGGCTTGTACTACAGCAGCTGAGATGTTGTGGGGTTCTAGAAGTTGTTCGAATATCAAGATCAGGATTTCCTACTAGAATATCACACCAAAAGTTTGCTAGAAGATAcggttttcttcttcttgagaATGTTGCATCTCAGGATCCTCTTAGTGTGTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCAGAGATGTATCAAGTTGGCTAcaccaaattattttttcggACAGGGCAGATTGGGGTGCTTGAAGATACTCGAACTCGTACCCTTCATGGTATTTTACGTGTTCAAAGCTGCTTCAGGGGCCACCAAGCTCGTTGTTACTTCAAGGATCTCCGAAGAGGAATCACTACTCTCCAGTCatTTGTTAGGGGAGAGAAATCCAGAAAGGAATATGCAGTTTCACTTCAGAGACATAAAGCTGCTGTTTTAATACAGAAGCGGATGAAAGCAGTatttacaagaaaaagagTGAAGAATATTAATGATTCTGCAATTGTAATACAATCAGTTATTCGTGGTTGGCAAGTCAGACGATGCTCAGGAGATATAGGATTACCAAAATCTGGAGGCATGAAGGCTAATGAGTCAGATGAGGTGCTGGTGAAGGCTTCTTTCCTAGCAGAATTACAGCGGCGGGTACTCAAGGCAGAAGCTGCcctgagagaaaaagaagaggaaaatgaCATCCTTAATCAACGTCTCCTACAGTATGAGAGCCGTTGGTCCGAGTATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCAATTGCAAAGAAGAGCCTTGCGATTGATGATTCTGATAGAAACTCAGATGCGTCTGTAAATGCAAGTGATGACTGGGATATGGGAAGTAATCACAGGCGCCAAGAAAGCAATGGGGCAAGATCAATGAGTGCAGGTTTAAGTGTTATAAGTAGGTTGGCTGAAGAGTTTGAGCAGAGGAGTCAAGTATTTGGTGATGATGCAAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTAGAAGCAAATTTGACCCCAGACAGAGAGCTCAGAAGGTTGAAGCAGATGTTTGAAGCCTGGAAAAAAGATTATGGATCAAGATTGCGAGAAACAAAGCTGATTCTGAATAAGCTTGGAAGTGAAGAAGGTTCAATTgacaaagtgaaaaagaagtgGTGGGGCAGAAGGAACAGTACGAGGATAAACTG 3512 0.383 MSQTSRGLPAFQSIKSSPSEFKLMTNATPDLQGRQDVKLGKSEAISSSIPEKGALEKVSEKVQDCNGGMDLFDEDSPYGDKTISLEDRPSIADGDADSAPLPLPSISSSSREQKWSDTTPYATKKKLQYWFQLQNGKWELGKIISISGTESVISLPDGKVLKVKTESLVSANPDILDGVDDLMQLSYLNEPSVLYNLQYRYDQNMIYTKAGPVLVAVNPFKKVPLYGIDYIEAYKCKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPNSLREKLNLKSVEDYKYLRQSNCYSISGVNDAEEFWIVMEALDVVHIGKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLHNVAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINNSLAVGKKRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFDDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLKSNSCFRGERDKAFTVCHYAGEVMYDTTGFLEKNRDLLHLDSIQLLSSCTCHLPKIFASHMLTQTEKPVVGPLHKSGGADSQKLSVATKFKVQLFQLMQRLESTTSHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRISHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRTRTLHGILRVQSCFRGHQARCYFKDLRRGITTLQSFVRGEKSRKEYAVSLQRHKAAVLIQKRMKAVFTRKRVKNINDSAIVIQSVIRGWQVRRCSGDIGLPKSGGMKANESDEVLVKASFLAELQRRVLKAEAALREKEEENDILNQRLLQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSDRNSDASVNASDDWDMGSNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEANLTPDRELRRLKQMFEAWKKDYGSRLRETKLILNKLGSEEGSIDKVKKKWWGRRNSTRIN 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00099 1170 ProSiteProfiles IQ motif profile. 874 903 IPR000048 GO:0005515
Bva11g00099 1170 MobiDBLite consensus disorder prediction 70 117 - -
Bva11g00099 1170 MobiDBLite consensus disorder prediction 1 57 - -
Bva11g00099 1170 Pfam Myosin head (motor domain) 179 837 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 Gene3D Myosin VI head, motor domain, U50 subdomain 420 717 - -
Bva11g00099 1170 Gene3D - 359 418 - -
Bva11g00099 1170 Gene3D - 545 739 - -
Bva11g00099 1170 PANTHER MYOSIN 9 1170 - -
Bva11g00099 1170 Coils Coil 969 1003 - -
Bva11g00099 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 895 IPR027417 -
Bva11g00099 1170 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 124 173 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 SMART iq_5 850 872 IPR000048 GO:0005515
Bva11g00099 1170 SMART iq_5 922 944 IPR000048 GO:0005515
Bva11g00099 1170 SMART iq_5 873 895 IPR000048 GO:0005515
Bva11g00099 1170 SMART iq_5 899 921 IPR000048 GO:0005515
Bva11g00099 1170 SMART MYSc_2a 171 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 MobiDBLite consensus disorder prediction 1 32 - -
Bva11g00099 1170 Gene3D Kinesin motor domain 180 778 IPR036961 -
Bva11g00099 1170 ProSiteProfiles IQ motif profile. 853 880 IPR000048 GO:0005515
Bva11g00099 1170 MobiDBLite consensus disorder prediction 1041 1070 - -
Bva11g00099 1170 MobiDBLite consensus disorder prediction 74 93 - -
Bva11g00099 1170 MobiDBLite consensus disorder prediction 102 117 - -
Bva11g00099 1170 CDD MYSc_Myo8 191 837 IPR036022 -
Bva11g00099 1170 PRINTS Myosin heavy chain signature 535 563 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 PRINTS Myosin heavy chain signature 207 226 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 PRINTS Myosin heavy chain signature 261 286 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 PRINTS Myosin heavy chain signature 303 330 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 PRINTS Myosin heavy chain signature 588 616 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 ProSiteProfiles Myosin motor domain profile. 177 849 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva11g00099 1170 Gene3D - 853 900 - -
Bva11g00099 1170 Gene3D - 901 943 - -
Bva11g00099 1170 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1170 - -
Bva11g00099 1170 Pfam IQ calmodulin-binding motif 925 941 IPR000048 GO:0005515
Bva11g00099 1170 Pfam IQ calmodulin-binding motif 855 872 IPR000048 GO:0005515
Bva11g00099 1170 Pfam IQ calmodulin-binding motif 875 894 IPR000048 GO:0005515
Bva11g00099 1170 Gene3D - 783 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00099 Bva-Chr11 3125221 3143818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00099 10 1168 Myosins gene family AT1G50360 76.096 0.0 1805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00099 - - gmx:100801124 1984.92