Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00082 ATGGCGGAAACAGCGGAGCAGTCCCTTTCCGGCACCGAATCGCCGCAGTACTGGTGCTACCAATGCGACAAACGAGTGTCCATCGAAAGACAGGCTAATGAAACCGACATGACCTGCCTAGAGTGCAAGAATGGCTTTGTTGAATCCATTGCTTCCACATCTCCACAGCCATCTGTTCCATCTTCTGGCTCGTCCGATCACGTCGATGACCCGTACTTCGGGTCGCAATTTCTTCAGGTGCTTGGGCTACTCGCACAAACGGCACGTGATGATGACGCTTCGCCTCCGCCACCTCCAAACCGTGTCTCCGGCGGAGATTATCTAAGGATTGAGCTTGATCGGTGGGATCACGATGAGGAGGATGACGATGACGACGAAGAGGATGGAGTTGAGCTTCACGACGAAGGAGAAGAGCacgaagaaaatgaagaacagGAGGACAGACCCGTAAATGATAATCAACATGAGGACGACGAAGATCTGCGGCGTAGAAGACGCGATGGGCTGCGACTTCGGATCAGAGATTTGGCGACTCGTACGAGGGGCACGAGGAACCGGATCTTGGATTGGGCTGAGATATTGATGGGCCTTGAAGATAATTCCATAGAATTTCGGCTTCAAGTGCCGGAATCGGATCGGTATGTAGGAAATCCAGAAGACTACGTTGATGCAACTGAGTATGAAGCTTTGCTGCAGAGGTTGGCGGAGAGCGAGGGAGGAGGGAGGAGAGGAGCCCCACCGGCGGCAAAGTCAGCAGTGGAGGCATTACCAACAGTGAAGATTGAGTCAAAGGATGAGGCTTTGGTCTGTGCTATTTGTAAGGATTTGGTGGATGTTGGAGATATGGCAAAGAAATTGCCTTGTGGGCATAAGTACCATGGGGATTGCATAGTTCCATGGTTGGGGTCTAGAAATTCATGCCCAGTATGCAGGTTTGAGCTGCCAACAGATGACAAAGAATACGAGGACGGAAGGATTAAGAGGGTGACAGCCACTGCTGGTGGGGCATCGGGCTCCGGTGTAACGGACACAGGGTCGGGTTG 1043 0.5149 MAETAEQSLSGTESPQYWCYQCDKRVSIERQANETDMTCLECKNGFVESIASTSPQPSVPSSGSSDHVDDPYFGSQFLQVLGLLAQTARDDDASPPPPPNRVSGGDYLRIELDRWDHDEEDDDDDEEDGVELHDEGEEHEENEEQEDRPVNDNQHEDDEDLRRRRRDGLRLRIRDLATRTRGTRNRILDWAEILMGLEDNSIEFRLQVPESDRYVGNPEDYVDATEYEALLQRLAESEGGGRRGAPPAAKSAVEALPTVKIESKDEALVCAICKDLVDVGDMAKKLPCGHKYHGDCIVPWLGSRNSCPVCRFELPTDDKEYEDGRIKRVTATAGGASGSGVTDTGSG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00082 347 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 32 340 - -
Bva11g00082 347 MobiDBLite consensus disorder prediction 51 69 - -
Bva11g00082 347 MobiDBLite consensus disorder prediction 146 161 - -
Bva11g00082 347 MobiDBLite consensus disorder prediction 51 72 - -
Bva11g00082 347 MobiDBLite consensus disorder prediction 117 161 - -
Bva11g00082 347 Pfam Ring finger domain 270 311 IPR001841 -
Bva11g00082 347 SMART ring_2 270 310 IPR001841 -
Bva11g00082 347 SUPERFAMILY RING/U-box 265 317 - -
Bva11g00082 347 MobiDBLite consensus disorder prediction 88 107 - -
Bva11g00082 347 ProSiteProfiles Zinc finger RING-type profile. 270 311 IPR001841 -
Bva11g00082 347 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 32 340 - -
Bva11g00082 347 MobiDBLite consensus disorder prediction 117 145 - -
Bva11g00082 347 Pfam zinc-ribbon 16 50 IPR039525 GO:0061630
Bva11g00082 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 237 317 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00082 Bva-Chr11 2945951 2947285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00082 106 325 C3H Transcription Factor Family AT5G01980 39.189 3.20e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00082 - - gmx:100780991 395.201