Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00044 ATGGATTTGGACCAGTGGATCTCGAAGGTGAAGGAAGGGCGGCACCTTCTGGAAGAGGAACTTCAACTTCTTTGCGAATATgTCAAGGAGATACTTATTGAAGAGTCGAATGTTCAACCTGTCAATAGTCCAGTAACTGTTTGCGGTGATATTCATGGTCAATTCCATGATCTAATGAAACTTTTCCAGACAGGGGGTCATGTTCCTAAGACAAATTATATCTTCATGGGAGACTTTGTTGATCGAGGGTACAATAATCTTGAAGTTTTCACCATCCTTTTACTTCTGAAAGGTAGATATCCAGCCAATATTACCCTTTTACGTGGAAACCATGAAAGTAGACAACTAACCCAGCCACACTCACTTATGTTAGTTTTAGATCTATGCTTCTTCCTAGGTTATGGATTTTATGACAAATGCCAGAGGAAGTATGGAAATGCTAATGCTTGGCGGTGCTGTACTGATGTTTTTGATTATCTAACACTTTCAGCAATTATAGATGGAACTGTGCTTTGTGTCCATGGTGGCCTTTCTCCTGACATTCGAACTATTGATCAGATAAGGGTCATTGAAAGGAACTGTGAAATTCCACATGAGGGACCGTTTTGTGATCTAATGTGGAGTGATTCTGAAGACATTGAAACATGGGCAGTCTGGTTGGCTTTTTGGATCCAGACGCAGTTCAATCACATAAATAATCTTGATCTTGTCTGTCGAGCCCATCAAATCGTCCAAGAAGGCTTTAAGTATATGTTTCAAGATAAAGGTCTTGTAACTGTGTGGTCTGCACCAAACTACTGTTATCGATGTGGAAATGTGGCTTCTATTCTGagtttcaatgaaaatatgCAGAGagatgtgaaattttttattgagacAGAAGAGAACCAGATGAGAGGTCCCAGGACTGGTGTTCCATATTTCTTATA 929 0.3864 MDLDQWISKVKEGRHLLEEELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPKTNYIFMGDFVDRGYNNLEVFTILLLLKGRYPANITLLRGNHESRQLTQPHSLMLVLDLCFFLGYGFYDKCQRKYGNANAWRCCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDSEDIETWAVWLAFWIQTQFNHINNLDLVCRAHQIVQEGFKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMQRDVKFFIETEENQMRGPRTGVPYFL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00044 309 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 309 - -
Bva11g00044 309 SUPERFAMILY Metallo-dependent phosphatases 2 291 IPR029052 -
Bva11g00044 309 Pfam Calcineurin-like phosphoesterase 44 210 IPR004843 GO:0016787
Bva11g00044 309 ProSitePatterns Serine/threonine specific protein phosphatases signature. 107 112 IPR006186 GO:0016787
Bva11g00044 309 Gene3D - 1 309 IPR029052 -
Bva11g00044 309 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 309 - -
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 44 71 IPR006186 GO:0016787
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 184 211 IPR006186 GO:0016787
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 155 181 IPR006186 GO:0016787
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 73 100 IPR006186 GO:0016787
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 233 253 IPR006186 GO:0016787
Bva11g00044 309 PRINTS Serine/threonine phosphatase family signature 120 144 IPR006186 GO:0016787
Bva11g00044 309 SMART pp2a_7 16 294 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00044 Bva-Chr11 2424946 2434792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00044 43 177 Calmodulin-binding Proteins AT5G63870 42.029 2.58e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00044 K15498 - pvy:116128297 555.444