Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00035 atGAATTGCCTTATGGTTTGTCAATCTCGCATGTGGGTAGCAACCATTGTGTTTTACACATGCATTTGGATCCCATTGCAGCAGCTCAAGAGTATCCTTCAAAGATTGGTgggtttcatatttttcttctcttatgaCAGTACAGGTAGAGCTATGGCAATGGAGTTATTAGAGGCTCCTTTACTTCCTGCTACAAGGTATCAGGATTTGCTGAGCCATTCCTGTGTTGGAGAAGAGGGAAAGGTAGAAGAGACTTGCTCTATTTGTTTGGTAGAGTTTGAAGGAGAAGATGCAGTGAGCAAGTTCGGAAGATGTGGGCATGTGTTTCATCTAAACTGCATTCAGAGATGGCTagatcaaaataatttcactTGTCCACTTTGTAggtcttctttattttctcagcATCGTTTTCGTGTGTGTAGGGATTA 431 0.3643 MNCLMVCQSRMWVATIVFYTCIWIPLQQLKSILQRLVGFIFFFSYDSTGRAMAMELLEAPLLPATRYQDLLSHSCVGEEGKVEETCSICLVEFEGEDAVSKFGRCGHVFHLNCIQRWLDQNNFTCPLCRSSLFSQHRFRVCRD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00035 143 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Bva11g00035 143 Pfam Ring finger domain 85 129 IPR001841 -
Bva11g00035 143 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 133 - -
Bva11g00035 143 SUPERFAMILY RING/U-box 71 135 - -
Bva11g00035 143 SMART ring_2 86 128 IPR001841 -
Bva11g00035 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 132 IPR013083 -
Bva11g00035 143 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00035 Bva-Chr11 2196598 2197029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00035 8 130 C3H Transcription Factor Family AT4G38140 37.313 1.22e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00035 - - jre:108997319 161.77