Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00033 ATGCCGCGCAAGGTAAATTACGGACTTGATTATGATGACGACTATGATGACTATGAAGACTATGATTATGACGTTGACATAGAAGAATATGAACGACCTACTACAAAGCAAGAGAATTCTGGTACTGGGCTTTGGCGTTGCTCCATCTGCACTTATGATAATGATGACAGTATGACTTCTTGTGATATTTGTGGGGTTCTACGTGGTCCTTTGGTTAACACAGACACTCCCAACAATAACAAAGCAGTTGAAGGCATGTGCAAAAATTCTGGAGCATCCAAATTGGCCAAGTCTCTTTTTGCATCACTGCTGCAACAGATGCCCAAAGAgggtttattattttcaaagcaTAGTGATGGTTTTCTAATGGATGACAATAACGTCTACATGCTTGGGAATGTCCAAGGAGAATTTCATAAGACTTCTAGCACTCAAAACCATTGCCATCTAAACATAGCCCCTTTCAAGTTTGACATTCCATCCCCAGACGATGTGGTCACTAATAGGCTACATTCTTCCAAAACTGGTTTAAAAGCCACAGTTACCAACTCTAAAACTACTCGGCTTTCCTCAAACTTCGTGGTGAAGAATGAACTTAATGTACTATCTAATGCTGAAAGTTCAGACAAATCTTTGTCCTTAATGCAGAAAGGCAGGCCGGACAGTTTGGTGGGAAGCAAGTTTTCCAAGGATGTGACAGTTGATCAGGAAACAAGTAGTAATACATCAGAGAGTATGCAGGTTCCTTTGCAAAAGGGAAAAGcgaaaaatgtaaataaagtAAGCTCTTCGAAAAGTGAAACTGTTGATGAGATTAATTGCTCTATCAAAGATGGGAAACCTCAAAGTCTTGCAAGCAGTTTCAACAATATGGCTCTTGATGTAAGATATGGAAAGTCAGATGAATCAAATACTAAAGGACCTCACCAACATGTTCCCTATAAACCAGAAAAATGGATGCTCCCTCAACAATCTGAAGATGCACTGACTCAGCTGAATCTTGCTGTTGTTGGACATGTTGATTCTGGGAAGTCTACCCTCTCAGGTAGACTACTACACCTTTCTGGACGAATATCCCAGAAAGAAATGCACAAGTATGAAAAGGAGGCCAAGTCACAGGGCAAGGCATCCTTTGCTTATGCATGGGCACTGGATGAAAGTTcagaagaaagggaaagggGAATAACTATGACAGTGGCTGTTGCTTACTTTGACACTAAGAAATATCATGTTGTTGTGCTTGACTCCCCCGGCCATAAAGATTTTGTCCCCAACATGATTTCCGGGGCAATGCAAGCTGATGCTGCAATTCTTGTTATAGATGCCTCTGTTGGTGCATTTGAAACTGGTATGGATGGTAACAAAGGACAGACAAAGGAGCATGCACAACTTATCAGAAGTTTTGGTGTTGACCAGGTTATAGTTGTAGTAAATAAGATGGATGTTGTGGCATACTCCAAGGATCGGTTTGATTTAATCAGACAACAACTGGGAACATTTCTCCGCTCTTGTGGTTTCAAAGACTGTTCTCTGTTATGGATTCCCTTGAGTGCCatggaaaatcaaaatttggtAACAGCCCCTTCAGATGTTCGTTTCAAGACTTGGTATCGTGGACCTTATCTGTTAGATGCAATTGATTCTCTCCAAACTCCTGTCAGAGAATTCTCAGAGCCTCTACTGATGCCAATATGTGATTTCATCAAATCACCTACACTTGGGCAGGTGTCTGTTTGTGGTAAATTGGAAGCTGGAGCTCTTCAGAGTGGAACAAAGGTCTTAGTCATGCCTTCAGCTGTCATGGGAACGGTGCGGTCATTGGAGCGTGACTCTAATGCCTGCAGAGTTGCAAGAGCTGGAGATAATGTAGCTATCACGCTGCAAGGTGTAGATGGAAGTCATGTAATGGCAGGAGGTGTATTATGCCATCCCTCCTTTCCTGTTGCGGTTTCAAAACATTTGGAGTTAAAGGTGCTTGTCTTGGAAGGTTCAAGCCCCGTATTAGTGGGTTCTCAGTTAGAGTTTCATATACACCATGCGAAAGAGCCAGCTACAGTTTCAAGAATTGTGTCAGTACTTGATTCCAAGACTGGTAAGGTGACAAAAAAGTCCCCTCGCTGTCTCACTGCAAAGCAGAGTGCAGTAATTGAGGTAGTTTTATCTGAGCCAGTCTGTGTGCTGGAGTTCTCTAGCTGCAAAGCTCTTGGAAGGGTGTCTCTAAGATCATTAGGAAGAACGATTGCTGTTGGAATCGTGACACGAGTAACTGAAAAACGAGATTA 2282 0.411 MPRKVNYGLDYDDDYDDYEDYDYDVDIEEYERPTTKQENSGTGLWRCSICTYDNDDSMTSCDICGVLRGPLVNTDTPNNNKAVEGMCKNSGASKLAKSLFASLLQQMPKEGLLFSKHSDGFLMDDNNVYMLGNVQGEFHKTSSTQNHCHLNIAPFKFDIPSPDDVVTNRLHSSKTGLKATVTNSKTTRLSSNFVVKNELNVLSNAESSDKSLSLMQKGRPDSLVGSKFSKDVTVDQETSSNTSESMQVPLQKGKAKNVNKVSSSKSETVDEINCSIKDGKPQSLASSFNNMALDVRYGKSDESNTKGPHQHVPYKPEKWMLPQQSEDALTQLNLAVVGHVDSGKSTLSGRLLHLSGRISQKEMHKYEKEAKSQGKASFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGAMQADAAILVIDASVGAFETGMDGNKGQTKEHAQLIRSFGVDQVIVVVNKMDVVAYSKDRFDLIRQQLGTFLRSCGFKDCSLLWIPLSAMENQNLVTAPSDVRFKTWYRGPYLLDAIDSLQTPVREFSEPLLMPICDFIKSPTLGQVSVCGKLEAGALQSGTKVLVMPSAVMGTVRSLERDSNACRVARAGDNVAITLQGVDGSHVMAGGVLCHPSFPVAVSKHLELKVLVLEGSSPVLVGSQLEFHIHHAKEPATVSRIVSVLDSKTGKVTKKSPRCLTAKQSAVIEVVLSEPVCVLEFSSCKALGRVSLRSLGRTIAVGIVTRVTEKRD 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00033 760 PANTHER TRANSLATION FACTOR 48 758 - -
Bva11g00033 760 Gene3D Translation factors 557 646 - -
Bva11g00033 760 MobiDBLite consensus disorder prediction 206 262 - -
Bva11g00033 760 MobiDBLite consensus disorder prediction 229 262 - -
Bva11g00033 760 SUPERFAMILY Ran binding protein zinc finger-like 42 68 IPR036443 -
Bva11g00033 760 Pfam Elongation factor Tu GTP binding domain 332 546 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 Pfam Elongation factor Tu C-terminal domain 650 755 IPR004160 -
Bva11g00033 760 CDD HBS1_C_III 647 755 - -
Bva11g00033 760 Gene3D - 320 554 IPR027417 -
Bva11g00033 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 331 574 IPR027417 -
Bva11g00033 760 CDD EF1_alpha 333 553 - -
Bva11g00033 760 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 652 755 IPR009001 -
Bva11g00033 760 ProSitePatterns Zinc finger RanBP2-type signature. 45 64 IPR001876 -
Bva11g00033 760 PRINTS GTP-binding elongation factor signature 428 439 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 PRINTS GTP-binding elongation factor signature 392 400 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 PRINTS GTP-binding elongation factor signature 333 346 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 PRINTS GTP-binding elongation factor signature 412 422 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 PRINTS GTP-binding elongation factor signature 473 482 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 PANTHER OS04G0595300 PROTEIN 48 758 - -
Bva11g00033 760 Gene3D Translation factors 650 760 - -
Bva11g00033 760 SUPERFAMILY Translation proteins 552 645 IPR009000 -
Bva11g00033 760 SMART zf_4 43 67 IPR001876 -
Bva11g00033 760 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 329 553 IPR000795 GO:0003924|GO:0005525
Bva11g00033 760 ProSiteProfiles Zinc finger RanBP2 type profile. 41 70 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00033 Bva-Chr11 2161774 2171237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00033 43 82 Eukaryotic Initiation Factors Gene Family AT5G10630 60.000 2.11e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00033 K14416 - gmx:100801724 1085.09