Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00020 ATGGAACAGAAACTAGCAGCCACCCAAGAACAACCCTCGTCTtcggaggaagaagaagaagtctcaactgaagaagaggaagattcTTCTTCTGAAAAAGCAGAACAACATGACCAAACTGAACCATCTGTTCGTTCACCACTGAAATGCGTACCCGCTCTGCCACAACCAGCTTCCTCTTCGgaggatgatgaagaagagcATCATGAAGAAACTGAGCCTTCTGTCCGTCCACCACCTCCATCGAAGTCTGAAAAGATGCCCACCGGTGCTACTAGAGGCTCCCAAAGGCAATCTGGATCATCTGAATCTAGAACGTCAGAGTCCGGATCATCCGACTCTGTTGAGATTTCAGACCGGAAAAGGGCTCGGAACCCAAGGTCCCAACCTTCAGTTACACCAGCCAGATCGACTATGAAAAGCACCACTAAGAACTCTCACCCGACGAATGATTCAagaattatcaaaagaaagcTGTTTCAGCATAAAGCTTCTGATGCTCCAGCAGAAGAAAGGATTCCCGCGATGGAGAAATCTAGTACTGTTGAACCGAAGAAGCTGTTTCAGAGGGTGTGGACTGAAGAGGATGAGATTGCTCTCCTGAAGGGTGTGGCTGAATATTGGGAGAAGAATGGAACTGACCCATGTAAGGTTCAGAATGCATTTCATGATTTCATTAAAGAATCGTTCAATGTTAACTTTTCAAAAAGTCAGTTGTTTGATAAGATTCGAAGGTTGAAGAAGAAGTATGAGAATAATgcaaggaaagggaaaaatgGTCAAGATCCTAAGTTCTCTAATGGACATGAGAAAGATTCATTTGAACTGTCAAAGAAAATCTGGGCTACTGAAGGAACCATTGGAGGAGCACCAAACCCAAAGTCTGATATCACAAATAGCATTCAGCAACTTCCTCTGAAAGCCAATCTGCTGCTTCCATCACCAAATGCAAATGAAGTTGCAGAAGTGAACAAATTTCTGGGTATATCTGAATCGTCTGAGGATGCCATACAGAAAGGATTGCAATTGGTTGAAGCATCAAAGAGGGAAGAATTGAAGGAAAAGTTGAacgatttaaaatttattgaattggaGAACCTTGTGAAGCGTACTAAACTAATGCATAAACAGGCCAAATTGGTATTGGAGGCAGTTAAGTCATCAAATGATCTTTA 1175 0.3864 MEQKLAATQEQPSSSEEEEEVSTEEEEDSSSEKAEQHDQTEPSVRSPLKCVPALPQPASSSEDDEEEHHEETEPSVRPPPPSKSEKMPTGATRGSQRQSGSSESRTSESGSSDSVEISDRKRARNPRSQPSVTPARSTMKSTTKNSHPTNDSRIIKRKLFQHKASDAPAEERIPAMEKSSTVEPKKLFQRVWTEEDEIALLKGVAEYWEKNGTDPCKVQNAFHDFIKESFNVNFSKSQLFDKIRRLKKKYENNARKGKNGQDPKFSNGHEKDSFELSKKIWATEGTIGGAPNPKSDITNSIQQLPLKANLLLPSPNANEVAEVNKFLGISESSEDAIQKGLQLVEASKREELKEKLNDLKFIELENLVKRTKLMHKQAKLVLEAVKSSNDL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00020 391 PANTHER BNAANNG10740D PROTEIN-RELATED 11 388 IPR007592 GO:0006355
Bva11g00020 391 MobiDBLite consensus disorder prediction 1 154 - -
Bva11g00020 391 MobiDBLite consensus disorder prediction 127 149 - -
Bva11g00020 391 PANTHER STOREKEEPER PROTEIN 11 388 - -
Bva11g00020 391 Pfam Protein of unknown function, DUF573 188 281 IPR007592 GO:0006355
Bva11g00020 391 MobiDBLite consensus disorder prediction 13 29 - -
Bva11g00020 391 MobiDBLite consensus disorder prediction 88 113 - -
Bva11g00020 391 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00020 Bva-Chr11 2008469 2009644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00020 176 387 GeBP Transcription Factor Family AT4G25210 29.508 3.82e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Bva11g00020 DUF573 2.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00020 - - jre:108979338 209.149