Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00017 ATGTCAGCAATTCGCCGCTACGGGGATCCAACTTTACCCCATCCAGGAGCGTCCGACTTTCTGGCGTTCCCCGGAGCTCTCGTCTCTGATCAACTTCATCTGCCTCTTTCTTACACTGTAAACTATCACCGGCGACAGCAGGATGCGTGTAAAAATACAAACGCGGTAGTTTCTCCCACCGGAGTCCAAGACACAGAGGGCGTAAGCGAAGCGTTGCCGCCTCCAGTTACCCTCCTCTCTGCTTTTTGCAAACGCAATTCGGAAGCACAGTCATTCCAGAGAAGAACCGTCGAGAGATCTGCAAGTATCTCTTCCAAGAGGGAGTTTGCTTTGCAAAAATGGACTAGAAACCCTGAGATCGATGTAGCCTATCTACAGCTGACTAAGCTGATACAGTGCTTCAAGCCAAGGGTATACGCGGTGGAGATCCTTGCTTGGATAGACTATGAGTGGTTCCTCACTAATGAGGACATTGAGTTCCTTAAAATTACCAATTACCTAAATTTTCCTTATGAAATTGTGCCtccttttaataataatttctatttttatcatttattctA 563 0.4476 MSAIRRYGDPTLPHPGASDFLAFPGALVSDQLHLPLSYTVNYHRRQQDACKNTNAVVSPTGVQDTEGVSEALPPPVTLLSAFCKRNSEAQSFQRRTVERSASISSKREFALQKWTRNPEIDVAYLQLTKLIQCFKPRVYAVEILAWIDYEWFLTNEDIEFLKITNYLNFPYEIVPPFNNNFYFYHLF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00017 187 PANTHER 40S RIBOSOMAL PROTEIN S10 116 175 IPR037447 -
Bva11g00017 187 Pfam Plectin/S10 domain 114 176 IPR005326 -
Bva11g00017 187 Gene3D - 92 177 IPR036388 -
Bva11g00017 187 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 116 175 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00017 105 175 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 50.704 7.89e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00017 K02947 K09422 gmx:100797787 73.559