Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02160 ATGTCGAAGGTGGTGTGTGTAACTGGGGGCAGCGGCTGCATTGGATCATGGCTTGTCTCCCTCCTTCTCGGTCGCGACTATACTGTTCACGCCACTGTTAAAGATCTCAAGGATGAGAATGAAACGAAACATTTAGAAGCTCTAGAAGGAGCAGACACTCGCCTCCGTCTCTTCCAGATCGATCTCCTCGACTTGGATTCCATCGTCGCCGCCGTCAATGGCTGCGCCGGCGTCTTCCATCTCGCCTCTCCTTGTATCGTTGATCAAGTTCAAGATCCTCAGAAGGAGCTTCTGGACCCTGCGATTAAAGGGACGCTCAACGTACTCACAGCTGCGAAGGAAGCAGGGGTTGGGCGTGTAGTGGTTACTTCGTCGATCTCAGCTATTACTCCTAGCCCTAATTGGCCAGCTGATGCGGTTAAGGGAGAGGATTGCTGGACTGACATTGAATACTGCAAGCAAAAGGGATTATGGTATCCACTATCGAAAACACTAGCTGAGAAAGCAGCTTGGGAATTTTCGAAGGAGAAAGGTTTGGATGTTGTGGTGGTCAATCCTGGCACAGTGATGGGCCCTGTTATTTCACCAAGACTTAATGCAAGCATGATAATGCTTGTACGTATTCTTCAAGGCTGCACTGAAACATATGAGGACTTCTTTATGGGATCAGTGCACTTTAAAGATGTAGCCTTAGCACATATTTTGGTGTATGAGAACAAAGCAGCAACTGGTAGGCATTTGTGTGTTGAAGCTATCTCTCATTATGGCGACTTTGTGGCCAAGGTTGCTGTACTTCATCCTGAATATAATGTTCCTAGATTGCCAAGAGACACCCAACCAGGGCTGTTGAGAGCAAAGGATGCATCGAAGAAACTGATTGATTTGGGTTTACAATTCATTCCCATGGAGCAAATTATAAAGGAAGCAGTGGACAGTTTGAAGAGCAAAGGTTTCATTTCTTA 962 0.4667 MSKVVCVTGGSGCIGSWLVSLLLGRDYTVHATVKDLKDENETKHLEALEGADTRLRLFQIDLLDLDSIVAAVNGCAGVFHLASPCIVDQVQDPQKELLDPAIKGTLNVLTAAKEAGVGRVVVTSSISAITPSPNWPADAVKGEDCWTDIEYCKQKGLWYPLSKTLAEKAAWEFSKEKGLDVVVVNPGTVMGPVISPRLNASMIMLVRILQGCTETYEDFFMGSVHFKDVALAHILVYENKAATGRHLCVEAISHYGDFVAKVAVLHPEYNVPRLPRDTQPGLLRAKDASKKLIDLGLQFIPMEQIIKEAVDSLKSKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02160 320 PRINTS Glucose/ribitol dehydrogenase family signature 112 128 IPR002347 -
Bva10g02160 320 PRINTS Glucose/ribitol dehydrogenase family signature 4 21 IPR002347 -
Bva10g02160 320 PRINTS Glucose/ribitol dehydrogenase family signature 177 194 IPR002347 -
Bva10g02160 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Bva10g02160 320 Pfam NAD dependent epimerase/dehydratase family 5 244 IPR001509 -
Bva10g02160 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Bva10g02160 320 Gene3D - 1 320 - -
Bva10g02160 320 CDD FR_SDR_e 5 297 - -
Bva10g02160 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02160 Bva-Chr10 16283886 16287144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02160 3 320 Monolignol Biosynthesis Gene Families AT5G58490 80.189 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02160 - - jre:108989884 570.466