Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02093 ATGGCCTCTCAAGATCACCAGCACATATTTCAATGGCACTTCATTGATATTAACCACTCCAACTTCCACTCCTATGGCCAAGGCCTATTCCTCATTCTATTGTTCTTTACGATTCTCTTTTTCATCACCACCCTTTCCCTCTGTGTCCACTTCTGTCGCCGCCGCCTCACGGGATCCGCTGCCACGGCCTCTCCGGCACCGTTACCGGCATGTCAATGGATTGGAGTTGTTGACTACACGTACATCAAGAGTCCAGTATCGATGTCGGCAAAGAGTTTAGAGGTTGAAGCTGGTTTTGAGAGAAGCCAGTGCTGCATATGCTTGAGTGTTTTTCAAGAAGATGAGAAGCTGAAGGTGTTACCAGAATGTGGGCATAGCTATCATTCTGAGTGCTTGGAAAAGTGGCTAAGTGCAAACCCTAGTTGCCCTCTTTGTAGGGCTTCACTTCTCCAAGTAAATTCTATGGGAAAACTTACCATTTCCAATTCCTCAGAATA 497 0.4628 MASQDHQHIFQWHFIDINHSNFHSYGQGLFLILLFFTILFFITTLSLCVHFCRRRLTGSAATASPAPLPACQWIGVVDYTYIKSPVSMSAKSLEVEAGFERSQCCICLSVFQEDEKLKVLPECGHSYHSECLEKWLSANPSCPLCRASLLQVNSMGKLTISNSSE 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02093 165 Pfam Ring finger domain 103 146 IPR001841 -
Bva10g02093 165 SMART ring_2 104 145 IPR001841 -
Bva10g02093 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 154 IPR013083 -
Bva10g02093 165 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bva10g02093 165 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 2 154 - -
Bva10g02093 165 SUPERFAMILY RING/U-box 89 152 - -
Bva10g02093 165 Coils Coil 160 165 - -
Bva10g02093 165 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 154 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02093 Bva-Chr10 14769361 14769858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02093 9 149 C3H Transcription Factor Family AT3G11110 36.364 1.60e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02093 - - lja:Lj0g3v0098519.1 143.28