Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02087 ATGAACCCATCAGAGAAATTTGTTGAACAAGGAATATCCCAGCAGaatttaaaaaaagcttCTTGTGCAACTGTGCTCACTCTGGCTTATCAAAGTCTTGGAGTAGTTTACGGTGATCTCAGTACCTCCCCTCTTTATGTTTACAAGACTACCTTCTCAGGGAAACTAAGCCTCAAAAAAGATGACGAAGAAATCTTTGGGGTGCTTTCGTTTATCTTTTGGACATTTACTGTGATTGCTCTCTTCAAATACGTTTTCATTGTGATGTCTGCTGATGACAATGGAGAAGGAGGAACCTTTGCATTGTACTCACTTCTTTGCCGACATGCGAGACTAAGCATTTTACCCAATCAGCAACCAACGGATGAGAAATTGTCTGCTTATGCCACTGAACATTCTGCGGACACAGGGCAGTCTACTCTTCTGAAGTTGTTCATTGGAAAGTACCCAAGATTCCAGAAAGGATTATTGATCTTTGTTCTTCTCGGAACCTGTATGACAATTGGTGACGGTGTAATTACTCCTGCAATATCAGtTCTTTCGGCAGTGTCAGGCGTTAAAGTTAAATTCAGTCAACTCCATGATAATTATGTTGTTATCATATCATGTGTCATTTTAGTGGGCCTTTTCTCCATTCAGCATCATGGGACACATAGAGTTGCATTCATGTTTGCCCCAATTGTTGCAGCATGGCTTTTCTGTATCAGTGGTATTGGTATATACAATATATGCCATTGGAATCCAAAAATATACCGTGCACTTTCTCCCGTTTACATGTTGAGGTTCCTCAAGGCCACAGGCATTGAAGGATGGGTTTCATTAGGTGGAGTGGTCCTTTCAATCACAGGTGTGGAGACAATGTTTGCTGACTTGGGTCATTTTTCCGCACTCTCAATAAAGATAGCTTTCACATCTCTAGTATATCCGTCCCTGATTCTGGCATACATGGGTGAGGCTGCTTACCTCTCCAAGCACCATGATGATATCCAGAGAAGTTTCTACAAAGCCATACCAGAAGCTGTGTTTTGGCCAGTGTTCATAGTGGCCACTTTTGCAGCCGTTGTAGGAAGTCAAGCAGTCATTTCTGCGACCTTTTCTATCATAAGCCAGTGCTGTGCATTAAATTGTTTTCCCTCGGTGAAAGTTATTCATACTTCAAGCAAAATTTATGGACAGATATACATTCCAGAAGTCAATTGGATGTTGATGTGCCTTTGTTTAGCTGTCACCATTGGCGTGAGGGATACAAACATGATGGGTCATGCATATGGACTGGCGGTCACCATCGTTATGTTTGTGACAACTTGCTTGATGGCACTGGTAATTGTCATTGTCTGGAAGCAAGCAATAATAAAAGCCATCacatttttgttcttgtttggATCCATTGAACTCCTCTACATCTCAGCTTCAATCTGCAAGGTCCCTGAAGGAGGTTGGATCCCACTTGTGCTATCTCTTATTATTATGGGTATAATGTATACCTGGAACTATGGAAcaatgaagaaacaccaatTTGATGTGGAAAACAAGGTCTCAATGAGCAGGATCCTATCCTTGGGACCTCAACTCGGCATGGTCCGTGTCCCCGGAATAGGACTCATTTACACAAATTTGGCTTCCGGGGTCCCTGCCATTTTTGGACATTTTGTTACAAACTTGCCAGCATTCCATCAGGTGCTAGTTTTTGTCTGTGTCAAATCTGTTCAAGTCCCTTATATTAGTGAACATGAACGGCTTGTCATCAGTAGAGTTGGTCCAAGAGAGTATGGAATGTTTCGTTGCATTGTCAGGTATGGTTACAAGGATCTGCATCAGGAAAActataattttgagaataaattGGTATCTGGGCTAATACAATATGTAGAAACAGAAGAGTTTGTTCCAGAATCAGCACATGAAATGTCTACCAATGTGGATGGTGTTGCTCAGCATTCTTATACTGCTTCACATGATGAAGAGAATTTGCTTTCATCATCTTGTGATTTTCATGTGATGAAGAATTCTGTTTATAAAGACGAGTCAGTGCAAATTCTGAGAGCCAAAGAATCTGGTGTTGCCTACATACTTGGGCATTCTTATGCGAAGGCGAAGAAATCGTCATCCCTCTTAAAGAAATTTGCCGTAGAtgttgtgttttcttttctgagcAAGAATTGCAGAGAATCTGATGTTGTTCTGAATGTACCTCACACTTCTTTGCTTGAGGTTGGCATGGTCTATTATGTTTA 2234 0.3988 MNPSEKFVEQGISQQNLKKASCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLKKDDEEIFGVLSFIFWTFTVIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLSILPNQQPTDEKLSAYATEHSADTGQSTLLKLFIGKYPRFQKGLLIFVLLGTCMTIGDGVITPAISVLSAVSGVKVKFSQLHDNYVVIISCVILVGLFSIQHHGTHRVAFMFAPIVAAWLFCISGIGIYNICHWNPKIYRALSPVYMLRFLKATGIEGWVSLGGVVLSITGVETMFADLGHFSALSIKIAFTSLVYPSLILAYMGEAAYLSKHHDDIQRSFYKAIPEAVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPSVKVIHTSSKIYGQIYIPEVNWMLMCLCLAVTIGVRDTNMMGHAYGLAVTIVMFVTTCLMALVIVIVWKQAIIKAITFLFLFGSIELLYISASICKVPEGGWIPLVLSLIIMGIMYTWNYGTMKKHQFDVENKVSMSRILSLGPQLGMVRVPGIGLIYTNLASGVPAIFGHFVTNLPAFHQVLVFVCVKSVQVPYISEHERLVISRVGPREYGMFRCIVRYGYKDLHQENYNFENKLVSGLIQYVETEEFVPESAHEMSTNVDGVAQHSYTASHDEENLLSSSCDFHVMKNSVYKDESVQILRAKESGVAYILGHSYAKAKKSSSLLKKFAVDVVFSFLSKNCRESDVVLNVPHTSLLEVGMVYYV 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02087 744 TIGRFAM kup: potassium uptake protein 28 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva10g02087 744 Pfam K+ potassium transporter 30 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva10g02087 744 PANTHER POTASSIUM TRANSPORTER 2 627 - -
Bva10g02087 744 PANTHER POTASSIUM TRANSPORTER 671 744 - -
Bva10g02087 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 627 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva10g02087 744 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 671 744 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02087 Bva-Chr10 14674954 14679763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02087 122 744 Inorganic Solute Cotransporters AT2G30070 69.984 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02087 K03549 - gmx:100798458 1197.57