Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02085 ATGGCTTCTTGGGTGAGAGGGAAGTGTATTGGTAAGGGCGCGTTTGGCAGCGTTAGTGTTGGAGTTTCCAAATCGGATGGTCGAGTGTTTGCGGTGAAGTCCGTGGATCGTCAAACCGGGCTTCCGGGTCAGTTGGAGGCGTTGGAGAATGAAATTCGGATTCTCCGGCAGTTGTCGGAGTCGCCTTACGTGGTGGGTTTTCTTGGCGACGATGTCACGTTCGAGGAGGGTGCCACGACGTCGTACCGGAACTTGCATATGGAGTACTTGCCAGGTGGCACCGTTGCTGATATGGCACCTCGGAATGGCGGGAAGGATGCTGACGTGGACGAGCAGTTAATAAGGTACTACACTTGGTGCCTTGTGCAAGCGTTGAGATACGTACACTCTAAAGGGGTCGTCCACTGTGACGTGAAAGGGAGGAACGTTCTCGTGGGGCCCAATGGCGGTATCGCAAAGCTTGCCGATTTCGGTTCCGCGGTGCCTTTTGGCGGCAGTGGGATTAAGAAGCTGCCACGTGGCAGTCCGCTCTGGATGGCGCCGGAGGTGATTCGCGGGGAATCTCAGGGACCAGAGTCCGATGTCTGGTCCTTGGGCTGCACGGTGATCGAGATGGTCACCGGTAAACCGGCTTGGGAGGACCGCGGTGTTGACACGCTGATTGGAATCGGGTACTCTGGCGATTTTCCCGAGTTCCCGGGTCAATTATCGGAACTCGGCCGGGATTTTCTGGAGAAGTGTCTCAGAAGAGAACCGAGCCAGCGGTGGAGCTGTGATCAACTGCTACAGCACCCATTTTTGAGCTCTATTCCTCCCAATAAGCTCGTGGAATCGTCTCCACGGTGCGTTCTCGATTGGGTTAACTCAGATTTCTCCGACGAAGacgaggaagaagaaattggaGTCGACACTGTGCAATTAGCCAAGGATAGAATTGGTAAATTTGCTACAAGCATAAGGGTAAATTGGGAATCAGATGATTGGCTGGCGGTGAGGACAGTGGTATCCGACACAGAACCAACAACAACAGAAGCAGGTAATGGTGCTGCTGGTTACTGTGCGGAGGAAGGGGAGGGGACCAACTGGGAATATTCGGATTTGTCGAGGGtagaaagggaagaagaagggaCAAGTTGGGAAGGTTTGGATTCAACTGCAATgtcaacaataaaaaatgaagggGCAAATCCggaaatgttaaattttggtGGCTGGAGTTCAACGGTGTGGCTCTACTGTATTATAGCTGGGTGGAGCTGTCGGTATGGGTCGGGAAAGTTggatttagatttagatttagtggtgaaaaataaaaagagaagaatattcATTTACAgcttGATGGTGTTTGGTGACAATGAAGGCAAGCTGAGTTGTACTTGTTTCACTAATGgatatatgta 1403 0.4768 MASWVRGKCIGKGAFGSVSVGVSKSDGRVFAVKSVDRQTGLPGQLEALENEIRILRQLSESPYVVGFLGDDVTFEEGATTSYRNLHMEYLPGGTVADMAPRNGGKDADVDEQLIRYYTWCLVQALRYVHSKGVVHCDVKGRNVLVGPNGGIAKLADFGSAVPFGGSGIKKLPRGSPLWMAPEVIRGESQGPESDVWSLGCTVIEMVTGKPAWEDRGVDTLIGIGYSGDFPEFPGQLSELGRDFLEKCLRREPSQRWSCDQLLQHPFLSSIPPNKLVESSPRCVLDWVNSDFSDEDEEEEIGVDTVQLAKDRIGKFATSIRVNWESDDWLAVRTVVSDTEPTTTEAGNGAAGYCAEEGEGTNWEYSDLSRVEREEEGTSWEGLDSTAMSTIKNEGANPEMLNFGGWSSTVWLYCIIAGWSCRMVFGDNEGKLSCTCFTNGYM 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02085 441 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bva10g02085 441 ProSiteProfiles Protein kinase domain profile. 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02085 441 SMART serkin_6 4 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02085 441 CDD STKc_MAPKKK 3 267 - -
Bva10g02085 441 Gene3D Transferase(Phosphotransferase) domain 1 2 319 - -
Bva10g02085 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bva10g02085 441 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 355 - -
Bva10g02085 441 Pfam Protein kinase domain 6 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02085 441 SUPERFAMILY Protein kinase-like (PK-like) 4 293 IPR011009 -
Bva10g02085 441 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 2 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02085 Bva-Chr10 14644906 14647418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02085 4 378 MAP Kinase Kinase Kinase AT1G07150 57.181 8.79e-134 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva10g02085 Pkinase 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02085 - - qsu:112030082 473.011