Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02084 ATGTCTGTCTCCGTTGCGGTTTCTAATTCTCCCGTGTTCTCTCCGTCGTCTTCTCTGTTCTGCAACAAATCTGCGATGATATCTTCTTCCCCTGAGGCTTTATCCTTGTCGTTGGCTCATTTGAAGCCTACATCATCTACGGCTTCGGCCTCGTCTCCTTCTTCTCCGGGGTCGCCTTTCCGGCTTCGGTTCCCCAAGCCTCCAATTGGGTTTTCTAATTCGGCTTCAGCTTCTACTTCGGTGTCGTCTTCGACTTCGCCTACCAACACGGTATTGAAGAGGAAGAGGCCTGCGCGGCTTGATGTACCCGTTACTTCTATGACTTTTGGGGCTCCGCCGACGCCGTCGTCGGTGCAGAGGGATGCTGTGGAAGTTGAGGGTCTTGGATTTTCTGTATATTGCAAGAGAGGAAGGAGAGAGTACATGGAGGATCGTTATTCGGCTGCTGTTAATCTTCAAGGAGAACCCAAACAGGCTTTCTTTGGCATATTTGATGGCCATGGAGGTGCAAAAGCTGCTGAATATGCTGCACAAAACTTAGAAAAGAATATCATGGATGAAATTGTGAGGAGAGATGATGAGAATGAGGTCGAGGAGGCAGTGAAGCACGGTTACCTGACCACAGATTCTGATTTCTTAAAAGAGGATCTCCATGGCGGTACTAGCTGTGTAACAGCACTGATAAGGAACGGTAACCTTGTTGTGTCTAATGCCGGTGATTGCCGTGCAGTCATTAGCCGAGCCGGTGTTGCAGAAGCCCTCACATCCGATCACCGGCCTTCAAGGGAAGACGAAAGGGACAGAATTCAGACCCTGGGTGGCTATGTTGACTTATGCCGTGGTGTTTGGAGGATCCAGGGATCTCTAGCTATATCTAGAGGAATTGGAGACCGGCATCTCAAGCAATGGGTGACAGCAGAGCCCGAAACTCAAGTTCTTAGCATCGAAGCTGAACACGAGCTCTTAATATTAGCTTCAGATGGATTATGGGACAAGGTCAGTAACCAGGAAGCAGTAGACATAGCTCGTTCCTTCTGCATCAACAGCGACAAACCACAACCGATATTGGCCTGTAAAAAACTTGCAGAGTTGTCAACTTCGCGCGGCTCTCTTGACGATATTAGTGTTATGATAATCAAATTGGAGCATTATGTTTG 1157 0.484 MSVSVAVSNSPVFSPSSSLFCNKSAMISSSPEALSLSLAHLKPTSSTASASSPSSPGSPFRLRFPKPPIGFSNSASASTSVSSSTSPTNTVLKRKRPARLDVPVTSMTFGAPPTPSSVQRDAVEVEGLGFSVYCKRGRREYMEDRYSAAVNLQGEPKQAFFGIFDGHGGAKAAEYAAQNLEKNIMDEIVRRDDENEVEEAVKHGYLTTDSDFLKEDLHGGTSCVTALIRNGNLVVSNAGDCRAVISRAGVAEALTSDHRPSREDERDRIQTLGGYVDLCRGVWRIQGSLAISRGIGDRHLKQWVTAEPETQVLSIEAEHELLILASDGLWDKVSNQEAVDIARSFCINSDKPQPILACKKLAELSTSRGSLDDISVMIIKLEHYV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02084 385 SMART PP2C_SIG_2 137 381 IPR001932 -
Bva10g02084 385 SMART PP2C_4 115 379 IPR001932 -
Bva10g02084 385 CDD PP2Cc 129 381 IPR001932 -
Bva10g02084 385 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Bva10g02084 385 MobiDBLite consensus disorder prediction 73 92 - -
Bva10g02084 385 Pfam Protein phosphatase 2C 130 373 IPR001932 -
Bva10g02084 385 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 3 384 - -
Bva10g02084 385 SUPERFAMILY PP2C-like 127 382 IPR036457 -
Bva10g02084 385 Gene3D - 127 384 IPR036457 -
Bva10g02084 385 ProSiteProfiles PPM-type phosphatase domain profile. 129 381 IPR001932 -
Bva10g02084 385 PANTHER PROTEIN PHOSPHATASE 2C 3 384 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02084 Bva-Chr10 14633951 14636140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02084 1 385 PP2C-type Phosphatase Gene Family AT2G30020 63.476 4.44e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02084 K17506 - gmx:100797934 556.599