Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02073 ATGGCGGTCGAAGTGGCACGCTATTTTGGGAGGAGGAAGCGCAAAAGAAGGTCTGGAaatgagaaaaggaaacttCGTGTCAATGAGAGAGTGGaggtAAGAAGTGTGGAAGATGGCCTTCTGGGCTCATGGCACCCGGGGACAGTTATCCTATGTGAAAAGATGAAACGTCATGTGAGATATGATAATGTTTTGGATGATGATGGGTTGGATTTTCTCACTGAATTGGTGGTTGTTCCTGATGTTTTAGATGGTGTTTCTTCATCAACTTGCAATCAATGTGGGTACATTAGACCAGTGCCTCCTTTTTTGGAGTTTGGGACAGAGCTTCAATATGGTCTCTGTGTCGATGCAAACTATCAGGAAGCTTGGTGGGAAGGAGTTATTTTTGATCATGATGATGGTATGCAGGAAAGgaggattttttttccagATTTAGGTGACGAAATGAAGATTGGCATCGACCAATTGCGTATTACTCAGGACTGGGATGAAGTTACAGAAAATTGGGAGCGGCGAGGGAACTGGGTATTTCTCGAATTGGTTGAGGAGTGTGAACAGTCATCATATATTGCAGTTTCACTGAAGCAAATTTGGTATGATATGCAAGCCAAAAAGGATTTTATTAAGATTAAGGACTGGACTTCCAAGGCAAAGAACTTGTGGAGAGACTTGGTAATGGAAATAATTGGTGACTACTTCACTCTTACACTAAAAGAACTTATTCCAGTCTTGGAAATTTCAAATGGTTCCTTAGAAAAAGCACTGGAAACAGAGTCAGTTGAACTTACTACTGATGTTCATCATGATACTAGTCCTAATAATATATCTGGTTCTTATATTAAACATGTTGCCAGCCCAAAGGAAAAAGGTCACTCCCCAACTGTACTGGATACTGATCCAAACCAAGAGAGTACTGCTCCCATTCAAGAGAGATATGGTATGCATCTGCTAGGTGGAGTACAGGATCTGTGCATTGAGGAAGCTTTAAAGATTTCCTGCTCTGAGAAAGAAGTCTTGCCACAGGATGAACCAGTGCCTCCTGTGGAAGAAAAGTTACCTCAGAATCCAGAAAATATTTCCCGCTACGATTCTGGTGCTACTGGTGAAGTTGTTTCTGGTTCAGGTGGAGTACCAATTCTGTATATGGAGGAAGCTTTAAAGATTTCCTGCTCTGAGAAAGAAGTATTGCCACAGGATGAACCAGTGCCTGCCATGGAAGAAGAGTTACCTCAGAATCCAGAAAGTATTTCCTGCTACGATTCTGGTGCTACTGGTGAAGTTGTTGGTGTAGGTGGAGTACCAATTCTGCGTATTGAGGAAGCTTTAAAGATTTCCTGCCCTGAGAAAGAAGTCTTGCCGCAGGATGAATCTGTGCCTCCCATTGAAGAAAAGTTACCTCAAAATCCAGAAAATATTTCACGCAACGTTTCTGGTGCTACTGGTGAAGATGTTTCTGGTTTAGGTGGAGTACCAATTCTGTGTATTGAGGAAGCTATAAAGATTTCCTTCCCTGAGAAAGAAGTCTTGCCGCAGGAAGAATCTGTGCCTCCCATTGAGGAAAAGTTACATCAGAATCTAGAAAATATTTCCTGCTATGATTCTGGCACTACTGTTGAAGTTGTTTCTGGTTTAAGTGGAGTACCAATTCTGCATATTGAGGAAGCTTTAAAGATTTCCTGCTCTGAGAAAGAAGTCCTGCTGCAGGATGAATCTATGCCTCCCGTGGAAGAAAAGTTACCTCAGAATCCAGAAAATATTTCCTGCTATGATTCTGGTGCTATTGGTGAAGTTGTTTTTGGTTTAGGTGGAGTACCAATTCTGCGTATTGAGGAAGCTTTAAAGAATTCCTGTGCTGAGAAAGAAGTCCTGCCGCAGGATGAATCTGTGCCTCccattgaagaaaatatttcctgCTATGATTCTGGTGCTGCTGGTGAAGTTATTTCTGGTTCAAGAGGTTATGCAAAAAgcagaaaattcaaacaaggtaTGAGGTCTGTGCTCTGGGAACTCTTGAAACTCCCTGGGGCAGAATTCTACCCTGATGCTGTTAATGAGTATGTTGCTGCACGCCAAAGGAAAACTAAGGAACTTATGAAGACAAAAGTTCGTAAACATCTTGCATTTCTGGGATGGAAAATTGAGTTCAGAGAGAAAAAAACCTTTTACAACCAAAGGCAATACAAGTACACCTCACCTGGTGATGAAAAGTGTTACATGTCTCTTGATCAAGTTTGTaaacatttgaaaaatgaaaccaGCATGAACTCTTTGCCTTCCAAAGACAGTCACAGAATGATGCATCCATCACCTGACAGTAGCATTTCGCATCTGCACCTTGAACAACCAGAAAATAGTTGGGATCCAGATGATTTTCCCATGGTTGTGCCTCCTCCTCCTGTTGAAGTTAATGTCAATACTGAATGTTTTCCTCAAGCCGTTGTGGAATATTACATGATGGCATCAAATCAGTCTCTCAAGGCTGTTAAGAAAACTGTGATACTGAAAGCAAAAGAACAATTATTATCTGCAGGGTGGATTATTAGCTATGGATGCAAGACAAGAAAGCAGTTGACCTACACTTCACCAAAACAAAGGACTTATCACTCACTTCTAAGAGCCTGCGGTGATTACATTAAAGAAAGTATTTCTAATTTGAACATATCTGCCTTGAAACCTTCAGATGCCCTAGGAATCAATGAGGGGAGCATTGGGAGTGATAATTTATTACATCGGTTACTTCAAAAAGAACCTGAACTGCTCACTGGAAATGGCAAGTGGAAACAAAAACGTTTGAAACATTTAAAGGCCAGCCTACCAAAAGTAGAGGAAAAAGATTTACCTAGTTGGGTGTTAAGATCAACCAAAAGGATGCAGAAGGTGCATGCTCCTAGTCTATCACATCAAAAGACTTTAAATGTACTCTCTTGGTTAATTGACAGCAAGGTGGTATTGCCAAGAGTGAAGGTCTATTATCAGGCAATAGGAAAACCTCGTTCTGAGCGTGAGGGTCGTATAACTAGTTATGGCCTCAAGTGCAACTGTTGTCTGAAGACATATAGTCTAAGAGGCTTTGAAGGTCATGCTAGTGGCAGTATTAGCCGCAGACCTGCTGTTAGTATCTTTTTGGAAGATGGTAGATCACTTCTAGATATACAGATGCAAATCATGCATGATTATCAGAAAAGAGAATCTCTAGCAAATCCATCTAGTGATTGGCATCAATGTGAGAATGACGGCATTTGTTCTGTTTGTCACTATGGTGGAGATCTAATTTTATGTGATCAATGCCCTTCGTCATTCCACGGGGATTGCCTTGGATTGGAGGACATCCCTGATGGTGACTGGTTTTGCCCATCATGTCAATGTGGGATTTGTGGTCAAAGCAAATTTGAAGGGATTGATGATGGAAATTTTCTTACTTGTAGTCAATGTGAACGTAAATATCACCTTTGGTGCCTGGGAAATAGAGGGATGCATAAGTCCGGAAGACATGGGAAAAATTGGTTTTGCAGCAAAAATTGCAAAATGATATATGCCGGCCTCCAACAACTATTAGGACAACCAGTTGTTGTTGGTGAGAATAATCTAAAATGGACATTGCTGAAGTGGGTGAATTCTGACAATTGTCAtcttagtaataataataactactTGGCTGAGAGTTACTGCAAGCTCAATGTTGCTCTTGGGTTAATGCATGAATGTTTTGAGACCCTAAAGGAACCTGATTCTAAAAGAGATCTCATTGAAGATGTTCTTTTCAGCAGATGGTCCAAGCTTAAGCGATTAAACTTCCAAGGATTCTATACTGTACTTCTGGAGAGAGAAGATGAATTGATTAGTGTTGCTACTCTAAGGGTCTATGGAGAGAAGGTAGCTGAAGTACCTCTTGTTGGTACCAGAGTTCAGTATCGTCGGCGTGGAATGTGTCGGGTTTTAATGAATGAGCTTGAGAAGGTGCTCAAGCAACTAGGGGTGGAGAGGCTGGTTTTACCTTCTGCTCATGTGACACTGGACACatggattaattattttggctTTACAAAGATGACAAATTCTGAGAGAAAACAGTTTCTGGACTGTACTTTCCTTGATTTTCAGCAGGCTATCATGTGCCAGAAACTGTTGACAAAGATTCCTTCTCGTGATATTGTTCCGTCAAAAGAGACCAAGCAAAAGTCACACGATATTTTAtctgtaaacaaaaatattgacTTTGATGGATCAAGTTCTTTATCTGATGTGCATCAAGCAGAAGATATGAAAGTATCCAGGATACCTGATCCACAACTGGTGGATGATATTGCAGCCAACAATGATAATCTTTGTAATGGTGTTATTGATCCAGTAACCATGCAACCAACTCTTCTGGGTGAACAGTACCAGAATGTAATCAATTCAGAGTGCTCAGCTGGAAATGTTAGTTTTGAACAGGCTGAAATGAATGATGGCTCATTCAAGTACTTCAGACGAAGAAAGTTAGCTGGCAGTGACTCGGCAGAATTTTCGATGTA 4520 0.3976 MAVEVARYFGRRKRKRRSGNEKRKLRVNERVEVRSVEDGLLGSWHPGTVILCEKMKRHVRYDNVLDDDGLDFLTELVVVPDVLDGVSSSTCNQCGYIRPVPPFLEFGTELQYGLCVDANYQEAWWEGVIFDHDDGMQERRIFFPDLGDEMKIGIDQLRITQDWDEVTENWERRGNWVFLELVEECEQSSYIAVSLKQIWYDMQAKKDFIKIKDWTSKAKNLWRDLVMEIIGDYFTLTLKELIPVLEISNGSLEKALETESVELTTDVHHDTSPNNISGSYIKHVASPKEKGHSPTVLDTDPNQESTAPIQERYGMHLLGGVQDLCIEEALKISCSEKEVLPQDEPVPPVEEKLPQNPENISRYDSGATGEVVSGSGGVPILYMEEALKISCSEKEVLPQDEPVPAMEEELPQNPESISCYDSGATGEVVGVGGVPILRIEEALKISCPEKEVLPQDESVPPIEEKLPQNPENISRNVSGATGEDVSGLGGVPILCIEEAIKISFPEKEVLPQEESVPPIEEKLHQNLENISCYDSGTTVEVVSGLSGVPILHIEEALKISCSEKEVLLQDESMPPVEEKLPQNPENISCYDSGAIGEVVFGLGGVPILRIEEALKNSCAEKEVLPQDESVPPIEENISCYDSGAAGEVISGSRGYAKSRKFKQGMRSVLWELLKLPGAEFYPDAVNEYVAARQRKTKELMKTKVRKHLAFLGWKIEFREKKTFYNQRQYKYTSPGDEKCYMSLDQVCKHLKNETSMNSLPSKDSHRMMHPSPDSSISHLHLEQPENSWDPDDFPMVVPPPPVEVNVNTECFPQAVVEYYMMASNQSLKAVKKTVILKAKEQLLSAGWIISYGCKTRKQLTYTSPKQRTYHSLLRACGDYIKESISNLNISALKPSDALGINEGSIGSDNLLHRLLQKEPELLTGNGKWKQKRLKHLKASLPKVEEKDLPSWVLRSTKRMQKVHAPSLSHQKTLNVLSWLIDSKVVLPRVKVYYQAIGKPRSEREGRITSYGLKCNCCLKTYSLRGFEGHASGSISRRPAVSIFLEDGRSLLDIQMQIMHDYQKRESLANPSSDWHQCENDGICSVCHYGGDLILCDQCPSSFHGDCLGLEDIPDGDWFCPSCQCGICGQSKFEGIDDGNFLTCSQCERKYHLWCLGNRGMHKSGRHGKNWFCSKNCKMIYAGLQQLLGQPVVVGENNLKWTLLKWVNSDNCHLSNNNNYLAESYCKLNVALGLMHECFETLKEPDSKRDLIEDVLFSRWSKLKRLNFQGFYTVLLEREDELISVATLRVYGEKVAEVPLVGTRVQYRRRGMCRVLMNELEKVLKQLGVERLVLPSAHVTLDTWINYFGFTKMTNSERKQFLDCTFLDFQQAIMCQKLLTKIPSRDIVPSKETKQKSHDILSVNKNIDFDGSSSLSDVHQAEDMKVSRIPDPQLVEYVSPLRSF 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02073 1443 Pfam PHD-finger 1082 1124 IPR019787 -
Bva10g02073 1443 CDD NAT_SF 1273 1333 - -
Bva10g02073 1443 PANTHER PHD ZINC FINGER PROTEIN 12 347 - -
Bva10g02073 1443 PANTHER PHD ZINC FINGER PROTEIN 616 1427 - -
Bva10g02073 1443 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1217 1379 IPR000182 GO:0016407
Bva10g02073 1443 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 616 1427 - -
Bva10g02073 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1125 1178 IPR013083 -
Bva10g02073 1443 SMART agenet_At_2 23 84 IPR014002 -
Bva10g02073 1443 SMART agenet_At_2 108 165 IPR014002 -
Bva10g02073 1443 Pfam Agenet domain 29 102 IPR008395 -
Bva10g02073 1443 ProSiteProfiles Zinc finger PHD-type profile. 1080 1125 IPR019787 -
Bva10g02073 1443 Pfam Acetyltransferase (GNAT) family 1259 1336 IPR000182 GO:0016407
Bva10g02073 1443 CDD PHD2_CHD_II 1083 1122 - -
Bva10g02073 1443 SUPERFAMILY FYVE/PHD zinc finger 1068 1126 IPR011011 -
Bva10g02073 1443 SMART PHD_3 1124 1177 IPR001965 -
Bva10g02073 1443 SMART PHD_3 1082 1123 IPR001965 -
Bva10g02073 1443 MobiDBLite consensus disorder prediction 341 368 - -
Bva10g02073 1443 Pfam Tify domain binding domain 1005 1056 IPR032308 -
Bva10g02073 1443 SUPERFAMILY FYVE/PHD zinc finger 1124 1174 IPR011011 -
Bva10g02073 1443 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1233 1357 IPR016181 -
Bva10g02073 1443 Gene3D - 1231 1357 - -
Bva10g02073 1443 MobiDBLite consensus disorder prediction 755 777 - -
Bva10g02073 1443 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 12 347 - -
Bva10g02073 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1074 1124 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02073 Bva-Chr10 14456422 14465193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02073 34 260 PHD Transcription Factor Family AT5G58610 44.167 3.39e-60 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bva10g02073 Acetyltransf_1 7e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02073 - - gmx:102661511 778.089