Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02070 ATGCCTTCTTCAGGTGAATTTGATTCTCCTGATTCTTCACCAAGCCCTGATCAATCGCCGCCATCACCACCTTATCACGACAATGATCCATTTGAAACACCTCCATCACCATACATTAATGAATCACCGCCTGCTCCACCTTCCTGGTACAAGTCCTCTCCACCGTCACCATTTTCACCTTCGTCCTTTTCGGACTCACCAACAAAATCACCGTCAAAgcaatcatcatcatcacgCCACAAACACTCACATAAATCACCACCACCGCTACCGTCACCACCACCACAGTCACATTCCGAAGGTGGGAATGATGGATCAAAGAGAGCAGCAGTTGGAGTAGGCATAGGGCTTGGGctaatcatatttatttggaTCTTGATTTGTATAGTTCGCtcaagaaggaagaaaagagaggaaatgTACTATCGTGGAGATGCAAAAGGGAGTGATATTTATAATGGCAAGCAGCAGTACTCTAATTACTACAAAGATCAGAAGGGAGATCATGAGAGAAGGAATAACAGTGATTTTAGGTATGCCTCTTCAAAGGACCAACCTTTACCTCCTCCTCCAACTTCGCGAGGCACCATCACATATGAGGAATTGGAGGCTGCTACAGGTGGATTTGACGAAAAGAACTTGTTGGGACAGGGTGGCTTTGGCTATGTCCATAAGGGCATATTGTCTAATGGAAGGGAAGTTGCAGTTAAGAGCCTTAAAGCAAATAGTGGGCAAGGAGAGCAAGAATTCCAAACCGAGGTTGATGTCATTAGTCGTGTTCATCATCGCCATCTTGTGTCACTTGTTGGATATTGTATTTCTGGTAGTAAGAGATTGTTGGTCTATGAATTTGTACCCAATAAGACACTAGAATATCACCTTCATGGAAAGGGTCTGCCTACCATGGATTGGCCTACTAGACTACGGATTGCAATAGGATCTGCCAGAGGGCTTACATACCTCCATGAAGAATGCCCTTTACGAATTATACATCGTGATATCAAAGGTTCAAATATCCTCCTTAACCTAAACTTCGAACCCAAGGTGGCTGATTTTGGATTGGCAAAATTGACAACTGATAACAATACTCATGTCTCAACTCGTGTCATGGGAACATTCGGGTACCTGGCACCAGAATATGCATCCAGTGGAAGACTGACTGAGAAATCTGATGTTTACTCATTTGGGGTCATGTTATTGGAACTTATCACTGGGAAGCGACCAGCAGGTGCAGTAGTGGATTCGTATGATCAGGATGGTTTAGTTGACTGGGCTCGACCGTTACTGAACAGCGGACTGCAGAATGGGAACCTTAAAGGATTGGTGGATCCATTTTTGGAGGGCAATTACAATGAGCAAGAAATGATGAGGATGGCACGCTGTGCTTCTGCGAGCATCCGTCATTCTTCGAAAAGGCGTCCAAAGATGAGCCAGATAGTAAAAATATTGGAAGGAGCTATATCATCCGAAGATTTGTCTTCTCTTTG 1487 0.4264 MPSSGEFDSPDSSPSPDQSPPSPPYHDNDPFETPPSPYINESPPAPPSWYKSSPPSPFSPSSFSDSPTKSPSKQSSSSRHKHSHKSPPPLPSPPPQSHSEGGNDGSKRAAVGVGIGLGLIIFIWILICIVRSRRKKREEMYYRGDAKGSDIYNGKQQYSNYYKDQKGDHERRNNSDFRYASSKDQPLPPPPTSRGTITYEELEAATGGFDEKNLLGQGGFGYVHKGILSNGREVAVKSLKANSGQGEQEFQTEVDVISRVHHRHLVSLVGYCISGSKRLLVYEFVPNKTLEYHLHGKGLPTMDWPTRLRIAIGSARGLTYLHEECPLRIIHRDIKGSNILLNLNFEPKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGRLTEKSDVYSFGVMLLELITGKRPAGAVVDSYDQDGLVDWARPLLNSGLQNGNLKGLVDPFLEGNYNEQEMMRMARCASASIRHSSKRRPKMSQIVKILEGAISSEDLSSL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02070 495 ProSiteProfiles Protein kinase domain profile. 209 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02070 495 MobiDBLite consensus disorder prediction 162 195 - -
Bva10g02070 495 SUPERFAMILY Protein kinase-like (PK-like) 185 483 IPR011009 -
Bva10g02070 495 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Bva10g02070 495 MobiDBLite consensus disorder prediction 55 74 - -
Bva10g02070 495 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 10 493 - -
Bva10g02070 495 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 10 493 - -
Bva10g02070 495 MobiDBLite consensus disorder prediction 162 178 - -
Bva10g02070 495 Gene3D Transferase(Phosphotransferase) domain 1 285 493 - -
Bva10g02070 495 MobiDBLite consensus disorder prediction 1 106 - -
Bva10g02070 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Bva10g02070 495 Gene3D Phosphorylase Kinase; domain 1 173 284 - -
Bva10g02070 495 CDD STKc_IRAK 215 485 - -
Bva10g02070 495 SMART serkin_6 209 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02070 495 MobiDBLite consensus disorder prediction 14 54 - -
Bva10g02070 495 Pfam Protein tyrosine and serine/threonine kinase 212 481 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02070 Bva-Chr10 14429814 14434583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02070 90 494 Trihelix Transcription Factor Family AT5G38560 49.763 9.14e-130 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva10g02070 PK_Tyr_Ser-Thr 6.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02070 - - gmx:100777163 491.115