Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02053 ATGAAATTCCCAACTTCTCATTCATCTCCGtcatcattatcatcatcttcttcatcaacACTCGCTTTCGACCCAGCAATGTGCAGTTCAAAAAGTGCCACTGCTGGGTGCCTCTCTGCGATTCTTCGCAGAATCCTCTGTTCTGGTGGGCTCCCAACACACCCATCTGATCAAATTAGAGAATTTGATTCCGCAGCGAGTgatagagataaaaaatttaaggctCAGAAGAAGGTTGAAGATGCTGCTGCTACTGTTAATGCTTGTTCAAACACTCCTGGAATTGTTGCAAGGTTAATGGGGTTGGATTCAATGGTGGAAAGAGAAactccatcttcttcttcggCTTCTTCGCTTTCGCGTAGCCGATCCATGAACTCTGTGGATTACTTGGGGGAATCCAATTCAATCCGGGGTTTGCATAGAAGGGTTAAATCTACGTTGTCATTTCGCGAGGTGCCACCCTTTGTTGAGCTAGAAAACGAGAACTTTTTCATCCTCAGCTTCGAAAATGTCAGAGAAAGTAAGGAATTCAGATCAAAGGGGAAGAAAACTGAGATGAGTTCTTCAGGGTTGAAGCAGAAACGAATGGAGAGACAGAAAATGAAGGAACATAGCAGAGAAAATGTGtctcaagaaaaaattctcaatgaaaaggagaaattgaGAAGAAGGGTGTGTGAAAAATCTCCCAGAAATGTTCCAGGCAATGTTAGTAAGCTTCGAGAAATTACTAACACAGTTTCTCGGTTCAGGATTTCTTCTGAAAACAAGTACTTCAATTCAGAAGCTGGGAAACTCTCTCCCAGTTCAAAGTCTATAAAGCACAAGGAAATTTTGAATGGTGAAAAACTGAAGAGcaggaagaaaaaggagaagaagaaaacaagttgCAGCACCAAAAAGAAGACAGAACTTGACTGCAATTTACAAGAATCAAGCCCCGTTTCTGTCCTTGATTTCGAGCGCAAAGCTCATGAATCAGCAGATTCTTGCGTGCCAGGATTGAgttcaagaagaaaattatcagCAGAGCTTGAAAATGAGCAGAAATCTCTTCTGCTTTCTGATGGTAacttggagaagaagaaatatgatggatcaaattcaaagagaaaagagaataataatgCTCAAGAGTACATAGAAATTTGGAGTGAAGTTTTGAGGCTAGTTGAAGATGATTTGGTTGGATCAAAAGGGATAGAAGCAAGGGTGTGGAAGCAAGGTGATTCTCTGAATTTAAGTGCAGATTTTGAGTCAGAAATTTTGGATCACTTGTTAGATGAGTTCATAGATCAACTTGTAGGAGACCCTTTGAAAAGTTTGTa 1331 0.3516 MKFPTSHSSPSSLSSSSSSTLAFDPAMCSSKSATAGCLSAILRRILCSGGLPTHPSDQIREFDSAASDRDKKFKAQKKVEDAAATVNACSNTPGIVARLMGLDSMVERETPSSSSASSLSRSRSMNSVDYLGESNSIRGLHRRVKSTLSFREVPPFVELENENFFILSFENVRESKEFRSKGKKTEMSSSGLKQKRMERQKMKEHSRENVSQEKILNEKEKLRRRVCEKSPRNVPGNVSKLREITNTVSRFRISSENKYFNSEAGKLSPSSKSIKHKEILNGEKLKSRKKKEKKKTSCSTKKKTELDCNLQESSPVSVLDFERKAHESDSCVPGLSSRRKLSAELENEQKSLLLSDGNLEKKKYDGSNSKRKENNNAQEYIEIWSEVLRLVEDDLVGSKGIEARVWKQGDSLNLSADFESEILDHLLDEFIDQLVGDPLKSL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02053 442 Coils Coil 202 222 - -
Bva10g02053 442 MobiDBLite consensus disorder prediction 179 217 - -
Bva10g02053 442 Pfam DUF761-associated sequence motif 92 105 IPR032795 -
Bva10g02053 442 PANTHER OS05G0128300 PROTEIN 1 441 - -
Bva10g02053 442 PANTHER - 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02053 Bva-Chr10 14250636 14252274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02053 30 434 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 30.583 2.68e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02053 - - gmx:102660191 328.946