Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02049 ATGATTACATCAGGAATCTTGTACCTTTCTAATTGGTTTTCACTAGCCAATGGAATCAACTACAAGTGTTTAGTTATAGGTAGTTCTTTAAATCTTGCTATAAGATGGCATGCTGTTGCTTCATGGACTTGGGATGCCCACGACGAAACATGTGGTATTTGTAGGATGGCCTTTGATGGATGTTGTCCTGACTGTAAACTTCCTGGTGATGATTGCCCATTGATTTGGGGTGTATGTAATCATGCATTTCATCTCCACTGCATCCTCAAGTGGGTGAATTCTCAGACTTCGCAAGCGCATTGCCCCATGTGCCGTCGAGAATGGCAGTTTAAAGGAAGCGAATA 344 0.4244 MITSGILYLSNWFSLANGINYKCLVIGSSLNLAIRWHAVASWTWDAHDETCGICRMAFDGCCPDCKLPGDDCPLIWGVCNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKGSE 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02049 114 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 113 IPR013083 -
Bva10g02049 114 PANTHER RING BOX 34 112 - -
Bva10g02049 114 SUPERFAMILY RING/U-box 34 111 - -
Bva10g02049 114 CDD RING-H2_APC11 48 110 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Bva10g02049 114 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 34 112 - -
Bva10g02049 114 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 35 111 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Bva10g02049 114 ProSiteProfiles Zinc finger RING-type profile. 62 105 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02049 Bva-Chr10 14204502 14205800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02049 62 105 C3H Transcription Factor Family AT1G72220 41.304 3.51e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02049 K03358 - gmx:100776546 189.504