Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02048 atgaagaagaagaagaagaaCGCCGTTAGCGGCCTCGGCTCCGGCTCCACCATTGCCGTTACCTATGTTACTGCCACTGTTTGTGGGATTATTGCTGGTGAGCCCACCCAGAGAATACAATGCTatcaaaatggacaaaatgTTCCAGTCCTGCCCAATTCTTCCTATCAAGCCATCTCCGGTGGCCGGAGCTTCTTTTGCGGCCTTAGGAATGGTGGGTTAAGCCTCCATTGTTGGGACACTGCTTTAACAAACTCAAGCTTCCAACCCAAACGCTTATATTACAGTAAATCCACACAATTGACTGATCTAACAGTTGGGGATGCTCAAGTTTGTGCCAGAGAAGTAAACTCCGGTATTGCTCGGTGCTGGAGAGGTAATGGGTATGAATTTCCTTCACCTGGGGAGGCATTTCGATTTCGTAGCATCACTTCTGGAAGTGGGTTTTCTTGTGGGATTCTGAAGGTAAATTACAGAGTTTGGTGTTGGGGTCAGAGAGAAATCGCAGGTGAGATTCACAAACTGTTTGAGAATTTGTCAATGTCAAGCTTAGTTGCTGGAGAGTCTCATGTTTGTGGTTTGACTACCAATGGGGCTTTAATTTGTAAAGGAAACAATGATTCTGGGCAATTGAATGTTATTTTTAGTTCAACTTATGAATTCTCAGGCCTTGCTTTGGGTGCAAATTTCACTTGTGCTGTTAGACCCAGAAATGGAATGGTTGTATGTTGGGGAGGAACAAATAGATTTGAATTTGACAGTGACATGATTAAGGATGTTTCTTTTGAGTCAATTGTTGCtggtttggattttgtttgtgGAATAACTACTAAGAATTTGTCCATGTTCTGTTGGGGACCTGGTTGGTCTGGTAGGCTTAATTTGCCTAGTGATCTTCCTTTGGGAGTGGTTCTTCCAGGTCCATGTGTTGAGGATTCTTGTAGTAATTGTGGTACTTATCCTAATTCTGAGGCTCTCTGTCATGGTTCTGGAAGCATATGCTATTCATGCCAGACTGAGATGCCACTTGCAGTGCCTTTGCCACCACTAAAGTCACCGCCACTGTCCCCACAAGGTGGCGAAAGAAACACAAAGGAATTGTTGGCATTTCTGATTGTTGGATCAATAGGGTCTTTTGTGGGTCTCTGCACAATTCTTTATTGCCTTTGGAGTAGATTATTGAAGAGAAATGTCGAAAATTCTGCGCAACCCACAAGCTCTGAGGCCTATGTAGATGTTGCTCCTCCCATACCTGGATTTAGCGAGGCAGCTTTTAGATCTTTTTCGAGCAAACGACAGAACTCAAGAACATTGAGGAGGAGCCATAGAAGTGGGtcatcaacaaaaattacGGACAAGACTCAGAGTTTCTCATTATCTGAACTTGCTGCTGCTACGAACAATTTCTCTAAGGACAATCAGATAGGCGCTGGGAGTTTTGGTGTGGTTTACAAAGGGCAGCTTACAGATGGCCAAGATGTGGCCATTAAAAGGGGAGAAACCAGtaccaaaatgaagaaattccAAGATAAAGAAAGTGCATTCGATTCTGAGTTAGTCTTGCTATCCAGGCTTCACCACAAGCATTTGGTGGGATTAATTGGGTTTTGTGAGGAAAATGATGAGAGACTTTTGGTTTATGAGTACATGAGCAATGGGTCATTGCATGATCATTTGCATGACAAGAGAAACACAGAGAAAAGTAGCAGCATTTTGAATTCTTGGAAGATAAGGATCAAAATTGCATTAGATGCTGCCAGGGGAATTGAGTATCTTCACAACTATGCAGTGCCACCCATCATTCACAGAGACATAAAATCCTCAAATATACTCTTGGATTCAAAGTGGAACGCAAGAGTTTCCGATTTCGGATTATCGTTGCTAATAGGATCTGAGTCAGAAGAAAGCACATCGACCATCATCAAAGCAGCTGGCACTGTTGGTTACATAGATCCTGAGTATTATGTTTTGAATGTCTTAACCACAAAGAGTGATGTTTATGGGTTAGGAGTGGTGATGCTGGAGCTTTTAACAGGGAAAAGAGCTGTATTCCAAAATGGAGAAGCTGAATCTGGCCCCATTGGGGTGGTGGAATTTGCAAAGCCAAGAATAGCAGCAGGAGAAATATGGAAAGTGTTGGATTACAGAGTTGGAGAACCAGAAGTGAATGAGATCGAGGCTCTTGAGCTTATGGCTTTAACTGCTATGCACTGTGTGAGCTTGGAGGGAAAGGACAGGCCTTGTATGGCTGACATTGTTGCTAACTTGGAGAAAGCATTAGCTTTTCATGAAGGTAATCTTGATGGTGGAAGATTCTCTGTCACTTCATACTCTGCCTCTTTCGAATG 2348 0.417 MKKKKKNAVSGLGSGSTIAVTYVTATVCGIIAGEPTQRIQCYQNGQNVPVLPNSSYQAISGGRSFFCGLRNGGLSLHCWDTALTNSSFQPKRLYYSKSTQLTDLTVGDAQVCAREVNSGIARCWRGNGYEFPSPGEAFRFRSITSGSGFSCGILKVNYRVWCWGQREIAGEIHKLFENLSMSSLVAGESHVCGLTTNGALICKGNNDSGQLNVIFSSTYEFSGLALGANFTCAVRPRNGMVVCWGGTNRFEFDSDMIKDVSFESIVAGLDFVCGITTKNLSMFCWGPGWSGRLNLPSDLPLGVVLPGPCVEDSCSNCGTYPNSEALCHGSGSICYSCQTEMPLAVPLPPLKSPPLSPQGGERNTKELLAFLIVGSIGSFVGLCTILYCLWSRLLKRNVENSAQPTSSEAYVDVAPPIPGFSEAAFRSFSSKRQNSRTLRRSHRSGSSTKITDKTQSFSLSELAAATNNFSKDNQIGAGSFGVVYKGQLTDGQDVAIKRGETSTKMKKFQDKESAFDSELVLLSRLHHKHLVGLIGFCEENDERLLVYEYMSNGSLHDHLHDKRNTEKSSSILNSWKIRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDSKWNARVSDFGLSLLIGSESEESTSTIIKAAGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFQNGEAESGPIGVVEFAKPRIAAGEIWKVLDYRVGEPEVNEIEALELMALTAMHCVSLEGKDRPCMADIVANLEKALAFHEGNLDGGRFSVTSYSASFE 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02048 782 SMART serkin_6 469 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02048 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Bva10g02048 782 CDD STKc_IRAK 475 758 - -
Bva10g02048 782 Gene3D Phosphorylase Kinase; domain 1 429 549 - -
Bva10g02048 782 Pfam Regulator of chromosome condensation (RCC1) repeat 183 210 - -
Bva10g02048 782 MobiDBLite consensus disorder prediction 431 451 - -
Bva10g02048 782 SUPERFAMILY RCC1/BLIP-II 44 165 IPR009091 -
Bva10g02048 782 SUPERFAMILY Protein kinase-like (PK-like) 443 756 IPR011009 -
Bva10g02048 782 Gene3D Transferase(Phosphotransferase) domain 1 550 767 - -
Bva10g02048 782 Gene3D - 8 175 IPR009091 -
Bva10g02048 782 Gene3D - 176 342 IPR009091 -
Bva10g02048 782 ProSitePatterns Protein kinases ATP-binding region signature. 475 497 IPR017441 GO:0005524
Bva10g02048 782 Pfam Protein kinase domain 470 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02048 782 ProSiteProfiles Protein kinase domain profile. 469 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g02048 782 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 5 769 - -
Bva10g02048 782 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 5 769 IPR044815 GO:0004674
Bva10g02048 782 SUPERFAMILY RCC1/BLIP-II 139 310 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02048 Bva-Chr10 14195690 14198150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02048 9 776 Receptor kinase-like Gene Family AT3G55950 53.117 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva10g02048 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02048 - - qsu:111994582 1023.85