Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02040 ATGACTCTGGGTTCGCTAGGTGGCGGCGGCGGTGTTCCTTCTGGGGTTTCTACAAATGAATCCAAAGTGTCAAATGTGAAGGTTATGGGGCGAGATTACTTGACCATGTCTCCTTCTGAGGCATCCTCCTACAATGGTGAGGCTGAACTTGAATTGGGTTTGGGTCTGAGCCTCGGCCGCGCAGCCACTGCCGGTGGAAAGGCGAAGGCTTCTGCATGGGGTGATTGTGGTCGTATCTTGACAGCCAAAGACTTCCCTTCTGTGGTCTCTCATGGCGCTGCTTCTCTTTTCTCAGAGAGAGTTGGTGGTACTTCTATTGGAACTAAGAGAGCTGCTGACTCTGTTTCTCAGGAAGGTGGATCTCCTACTGGCAGTCAAGTTGTTGGATGGCCACCTATAAGGGCATATAGGATGAACAGCTTGATCAACCAAGCAAAGACTCAGAGGGCTGAAGAAGACAAATCAAGTGACGAGAGAGATAATCCTAAAGATGATTCAATTGCCAAAAGCAACCACATGGCTCTCAAAGAAAAGGCCAATCTTGGATTTGTGAAGGTGAACATGGATGGAATCCGAATCGGCCGAAAAGTGGACTTGAATTCTCATTCAAGCTATGAGACTTTAGCTCAAACACTGGAAGACATGTTTTTCAGGCCTGCAACTGCTAATCAAATTGGTGGAGAGAAAGAACAGGCAACAAAACCATCTAAGCTCTTAGATGGAACATCTGAATTTGTGCTCACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCATGGCGAATGTTCCTCAGCTCAGTGAGAAGACTCCGAATCATGCGAACATCAGAAGCCAATGGACTTGCACCAAGatttcaagagaaaaatgagaaacaaagaaataaacccATTTA 905 0.4486 MTLGSLGGGGGVPSGVSTNESKVSNVKVMGRDYLTMSPSEASSYNGEAELELGLGLSLGRAATAGGKAKASAWGDCGRILTAKDFPSVVSHGAASLFSERVGGTSIGTKRAADSVSQEGGSPTGSQVVGWPPIRAYRMNSLINQAKTQRAEEDKSSDERDNPKDDSIAKSNHMALKEKANLGFVKVNMDGIRIGRKVDLNSHSSYETLAQTLEDMFFRPATANQIGGEKEQATKPSKLLDGTSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRFQEKNEKQRNKPI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02040 301 MobiDBLite consensus disorder prediction 144 171 - -
Bva10g02040 301 PANTHER AUXIN-RESPONSIVE PROTEIN 20 292 - -
Bva10g02040 301 MobiDBLite consensus disorder prediction 109 129 - -
Bva10g02040 301 Gene3D - 176 291 - -
Bva10g02040 301 MobiDBLite consensus disorder prediction 147 171 - -
Bva10g02040 301 Pfam AUX/IAA family 109 288 IPR033389 -
Bva10g02040 301 SUPERFAMILY CAD & PB1 domains 183 277 - -
Bva10g02040 301 ProSiteProfiles PB1 domain profile. 181 281 IPR000270 GO:0005515
Bva10g02040 301 MobiDBLite consensus disorder prediction 109 124 - -
Bva10g02040 301 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 292 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02040 Bva-Chr10 14124749 14127248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02040 185 288 B3 DNA Binding Superfamily AT1G59750 36.538 2.27e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva10g02040 AUX_IAA 3.1e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02040 K14484 - tcc:18603320 357.066