Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g02024 ATGTTGCGGGATGTTATCCACCCTCCACAACCACAGTCGCCGCCGCCACAGGCTGAGCAACTCCCCATTGATGAAATTTCAAGCCCAATCAGTGCTCGAATTTTCGAACTTTGTGACACTGAACTTTTCCCTGAGACCCTGCAAAATTCCGAAGTTACCTCCAGCTCAAACTGTTGCTATGATGAGAACTCCTCGTATACCACAAATATATCTCTAGCTTTAGATGTAGACAATAAGTTCATTAGCAATAGTAACACAGTCACCACCCCAACTAGCACCACAGCAACCAGCACCACCACCACAAACAACAACACAACCAACAGCAGTAATCTGTCCATCATCTTTGATTCCCAAGAAGAGATTGACAATGACATTTCTGCCTCCATAGACTTCTCATCAACTGcatctttttctgtttctccATTTCTCCCAGTCACAACACAACAGGAACAGTTTGATTTCTCTTCAGTGCAGCCTCAGGTAACACTGGCAGAAGCTTCAGTTGTGGAGGGCCTCTCTGAATATCCCGCTGATTCCGTTGCTCCCCTTATGGGAGTTCCATTACCATCCGTTCTTGAAGAGGATTTCTTATCTTCAATCCCTTCTTTTGTGCCTTTGAACCCTTCATCTCCTTCTTGTTCTTATCTCAGTCATGGCACAGGAGCTTACATGCCTCCTGGGTCCATTAATCCTGCTTTATCTGCTGACAATTCTGGGATGTTTGGTTGGGGAGTTCTTCTGGGTTCTGAACTGCAAACACAAGAACTGCAATACCAGGGAGAGAATGGAGGAATCTTTTGTCCGGATTCGATTCCTCGAGTATTTAACCCTCCACCAGACCTTCAGTCACTTAGCACTGAGAGTCAGCAACTGGTAGCTGGGGCTGCAAGTTCCACCACTTTGACACCAGAAATCTCAAACCTGGAGGATTCTACCTTAAAGGTTGGAAAACTTTCTGTTgagcaaaggaaagaaaagattcaTAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCCTGCAGAAAAACCTTGGCAGATAGCCGACCTCGCGTCAGAGGAAGGTTTGCGAAGAATGATGACTTTGGAGAGAATCATAGACCAGCAAGTAGCAAtcatgaagaagatgaagaagaagaagaaGTAGTTgtgaaagaagaagatgatatgATTGATTCTTCTGATATCTTTGCCCATATCAGTGGGGTGAACTCCTTCAAATGCAATTATTCAATCCAGTCATGGATTTA 1268 0.414 MLRDVIHPPQPQSPPPQAEQLPIDEISSPISARIFELCDTELFPETLQNSEVTSSSNCCYDENSSYTTNISLALDVDNKFISNSNTVTTPTSTTATSTTTTNNNTTNSSNLSIIFDSQEEIDNDISASIDFSSTASFSVSPFLPVTTQQEQFDFSSVQPQVTLAEASVVEGLSEYPADSVAPLMGVPLPSVLEEDFLSSIPSFVPLNPSSPSCSYLSHGTGAYMPPGSINPALSADNSGMFGWGVLLGSELQTQELQYQGENGGIFCPDSIPRVFNPPPDLQSLSTESQQLVAGAASSTTLTPEISNLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGENHRPASSNHEEDEEEEEVVVKEEDDMIDSSDIFAHISGVNSFKCNYSIQSWI 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g02024 422 Pfam CCT motif 323 365 IPR010402 GO:0005515
Bva10g02024 422 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 23 422 - -
Bva10g02024 422 MobiDBLite consensus disorder prediction 360 379 - -
Bva10g02024 422 PANTHER CCT MOTIF FAMILY PROTEIN 23 422 - -
Bva10g02024 422 MobiDBLite consensus disorder prediction 1 21 - -
Bva10g02024 422 MobiDBLite consensus disorder prediction 360 386 - -
Bva10g02024 422 ProSiteProfiles CCT domain profile. 323 365 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g02024 Bva-Chr10 14022382 14026512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g02024 323 381 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 1.60e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva10g02024 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g02024 - - aprc:113871720 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g02024 10 14022382 14026512 Bva10g02024 10 14022382 14026512 ECH