Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01991 ATGTCAGAAACTAAGTCAGCATACAAGACAGTGAAGAAACGAGACTCAGAAAAAGCTGCTAAACTCAGCAGTAATCCCCCtaggaagaaacaaagaaaagggagaaacCCAACCAGAGTCAGGCCAACTCCTGACCAGTCTTCCAGTCTTGGACATTCAAACTCCCGTATCTGTGAAAATCCTGCTTGTAAAGCCCTTCTACCTGTTGGTGGCACATTTTGTCGAAGGTGCACTTGCTGTATTTGTCATCGTTTTGATGATAACAAGGATCCCAGTCTCTGGTTGTTATGCACATCCGAATCTCCTCGTGGGAACCCCTGTGGGTCATCTTGTCATATTGAGTGTGCCCTTAAACATGATAAAGTGGGAGTTGTTGACCACGGCCAGCTGTTACAACTTGATGGTAGCTATTTGTGTAAAATTTGTGGTGAAGTTACAGGGATAATTGGATGCTGGAAGAAGCAGCTAAGTGTAGCGAAAGATGCTCGTCGTGTAGATGCACTTtgttttaggatttatttGAGCTACAGGCTTCTCAATGGGACTTCAAGGTTTAAGGACCTGCATGAAATTGTAAAAGATGCAAAGTCTAAACTGGAAACAGAAGTAGGTCCAGTGAATCGAGCTTCTCGGAAGATTGCACGAGGCATTGTCAGTAGACTCTCTGTCGCTAAGGATGTCCAGAGACTCTGCTCTATAGCAATTGAGAAAGCTGATAATTGGCTGTCTACCATTTCCTTTGTGGATCCAGAACCCAGAGAATGTTTACTCCCTGCTGCCTgcaaatttgtttttcaagAAGTAAAATCATCATCTATTGTTGTCTTATTGATTGAAATGCCTAATGCATCGTCTGACAACATCCAAGGCTACAAGTTCTGGTACTATAAGAGTAAGGAGGAGCCACCCACAAAAGATCCTGTTTGTGTGTTTCCAAGATCTCAGCGGAAATTTTTGATAACCCACCTGCAGCCTTGCACAAAATATACATTCCGGGTTATGTCTTATACCGATACTGGTGACCTGGGATATTCCCAGGCTGATTGTTTCACCGAGAGTGTagaaatatttagaaaacGCGGCAACAAAGAGAAGCAGCATATGGGAGGCAGTCCTTCTGACTCCCAAATGCAGTCCAAACCCACATTGACAGATTCTGGATTTAAGATTCAAAAGCTTGAAACAGTTTTATGTCTTGATGTGGCTCAAGAGAAAGCTAGCTCTGTTGACGTGAAAAATTGTTCTGAGCCAAGCAATATGGTCTTGAATGAAACGTCAGCAGAAGAGCAAAAGCCCACACTTTCTGGTGGCCTTGATTTAAATGTTGTTTCAGTGCCTGACTTGAATGAAGAACTGATGCATCCTTCTGAGCCTCCTAAGGTTGAAGATGGTAATAGTGCTTTTCCAGAGGCTGCGGATCACAATGTCGCTCTTAAAGCCGAGGAGAAAGCAGGTTCTGTGAAATCTAATGGTGGCCAAGACTCGAAAACCGGCACCAATGGGCCAACTGAGGAAATCCCAGCTGCTGATTCGTTTGCAGATAACTGTGGAAAAAGGGCAGTAAGCACAAATGAGGAGGTACATGATCATGGTAGCGCTCTTGCAAGTGGCTCTCCTTTGTTGATATCTGATGGTTTATGTTCCTTGGATAAAAACTTGGAGGATTGCGTGAAATCAATTTGTTGGCTAGAACGCGAGGGTCATATAAaaaagggatttagattgaaATTTCTGACATGGTTTagtttgagagcaacaaaGCAGGAACGTAGGGTGGTTAATACCTTCATTCAGACTTTGATCGATGATCCTAGCAGTTTAGCAGGACAACTGGTGGACTCATTTTCTGATATTATCAAGCAGGAGGCCCAGAAATA 1877 0.414 MSETKSAYKTVKKRDSEKAAKLSSNPPRKKQRKGRNPTRVRPTPDQSSSLGHSNSRICENPACKALLPVGGTFCRRCTCCICHRFDDNKDPSLWLLCTSESPRGNPCGSSCHIECALKHDKVGVVDHGQLLQLDGSYLCKICGEVTGIIGCWKKQLSVAKDARRVDALCFRIYLSYRLLNGTSRFKDLHEIVKDAKSKLETEVGPVNRASRKIARGIVSRLSVAKDVQRLCSIAIEKADNWLSTISFVDPEPRECLLPAACKFVFQEVKSSSIVVLLIEMPNASSDNIQGYKFWYYKSKEEPPTKDPVCVFPRSQRKFLITHLQPCTKYTFRVMSYTDTGDLGYSQADCFTESVEIFRKRGNKEKQHMGGSPSDSQMQSKPTLTDSGFKIQKLETVLCLDVAQEKASSVDVKNCSEPSNMVLNETSAEEQKPTLSGGLDLNVVSVPDLNEELMHPSEPPKVEDGNSAFPEAADHNVALKAEEKAGSVKSNGGQDSKTGTNGPTEEIPAADSFADNCGKRAVSTNEEVHDHGSALASGSPLLISDGLCSLDKNLEDCVKSICWLEREGHIKKGFRLKFLTWFSLRATKQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIIKQEAQK 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01991 625 MobiDBLite consensus disorder prediction 368 383 - -
Bva10g01991 625 MobiDBLite consensus disorder prediction 482 510 - -
Bva10g01991 625 Gene3D Immunoglobulins 258 354 IPR013783 -
Bva10g01991 625 MobiDBLite consensus disorder prediction 40 54 - -
Bva10g01991 625 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 622 IPR044514 GO:0010048|GO:0040029
Bva10g01991 625 Pfam PHD - plant homeodomain finger protein 69 176 IPR032881 -
Bva10g01991 625 MobiDBLite consensus disorder prediction 1 24 - -
Bva10g01991 625 Pfam Fibronectin type III domain 263 343 IPR003961 GO:0005515
Bva10g01991 625 MobiDBLite consensus disorder prediction 361 383 - -
Bva10g01991 625 MobiDBLite consensus disorder prediction 488 504 - -
Bva10g01991 625 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Bva10g01991 625 SUPERFAMILY Fibronectin type III 266 345 IPR036116 GO:0005515
Bva10g01991 625 PANTHER VIN3-LIKE PROTEIN 1 4 622 - -
Bva10g01991 625 MobiDBLite consensus disorder prediction 1 54 - -
Bva10g01991 625 CDD FN3 262 341 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01991 Bva-Chr10 13832320 13842215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01991 54 619 PHD Gene Family AT3G24440 44.522 3.01e-150 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01991 - - gmx:100815645 767.689