Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01985 ATGAAGGGACTTTGTGCTAATCACAATGTCAAGTTGATAACTGTGGCTAAAGCTAAAACTCTTGGTGAATGGGCTGGGTTGTGCAAGATTGATTCTGAGGGAAAAGCAAGGAAAGTAATCGATTGCTTTTGTGTTGTTGTCAAGATGGAATGTCCTGGGCTTGGGAATAGGATCCAAAAGAAAGCAGCCTATCTGCAAGAGCTGGAGAAGCAAGTTCAAAGTCCGAATTCGTTTGTTCCAAAGCCGTCCCTGATATCATATCATGATTCATATTGTACAATggaatttttgataaaaagacTCCAAGGTTCTATCTACTACGTTTA 326 0.3834 MKGLCANHNVKLITVAKAKTLGEWAGLCKIDSEGKARKVIDCFCVVVKMECPGLGNRIQKKAAYLQELEKQVQSPNSFVPKPSLISYHDSYCTMEFLIKRLQGSIYYV 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01985 108 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 2 46 IPR004038 -
Bva10g01985 108 Gene3D - 1 71 IPR029064 -
Bva10g01985 108 PANTHER 40S RIBOSOMAL PROTEIN S12 2 48 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva10g01985 108 SUPERFAMILY L30e-like 4 48 IPR029064 -
Bva10g01985 108 PRINTS Ribosomal protein S12E family signature 37 50 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva10g01985 108 PRINTS Ribosomal protein S12E family signature 12 33 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bva10g01985 108 PANTHER 40S RIBOSOMAL PROTEIN S12 2 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01985 Bva-Chr10 13753688 13755991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01985 1 48 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 70.833 2.92e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01985 K02951 - qsu:112041094 87.0409