Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01956 ATGAATTTTGCTGATTTTATAGATTTAGGTTTGAGGAAACAAAATACAAGGACATGCGGGCTTGATGATGTTGtcttaaatgaattttctttcttttatgTGGGATTTCATCAACCAGTCCAATCTGCAACCCAGAGTAAGGGAAACCGCGATCGAAGTTTGGAAATGGAAATATGGCATGATTTAGCCAACATCTACACTACTTTGTCCCAATGGCGAGATGCTGAAGTCTGTCTTTCAAAATCTCAGGCTATCCATCCTTTTTCTGCTTCTAGATTTCATTCCACAGGTTTACTCCATGAATCTAGAGGCCTTCACCAAGAAGCTCTGAAATCATTTAGGAAAGCATTAGATATTGATCCGAACCACGTGGCGAGTTTGATATCCACAGCCTGCGTTCTCATGCAGCTTGGTGGTCAGTCATCATCCATTGCAAGAGGCCTTCTTACTGATGCACTAAGACTAGATAGAACAAACCCTTCTGCTTGGTACAATCTTGGGCTGCTTTACAAAGCTGATGCAGGAACATCGGCATGGGAAGCTGCTGAATGCTTTGAGGCAGCTGCTATTCTTGAAGAATCTTCTCCAATTGAACCCTTCAGATA 605 0.4099 MNFADFIDLGLRKQNTRTCGLDDVVLNEFSFFYVGFHQPVQSATQSKGNRDRSLEMEIWHDLANIYTTLSQWRDAEVCLSKSQAIHPFSASRFHSTGLLHESRGLHQEALKSFRKALDIDPNHVASLISTACVLMQLGGQSSSIARGLLTDALRLDRTNPSAWYNLGLLYKADAGTSAWEAAECFEAAAILEESSPIEPFR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01956 201 Pfam Tetratricopeptide repeat 97 123 IPR019734 GO:0005515
Bva10g01956 201 PANTHER PROTEIN NPG1 42 201 IPR043376 -
Bva10g01956 201 Gene3D Tetratricopeptide repeat domain 40 198 IPR011990 GO:0005515
Bva10g01956 201 PANTHER OS10G0471400 PROTEIN 42 201 - -
Bva10g01956 201 SUPERFAMILY TPR-like 56 171 IPR011990 GO:0005515
Bva10g01956 201 ProSiteProfiles TPR repeat profile. 90 123 IPR019734 GO:0005515
Bva10g01956 201 SMART tpr_5 90 123 IPR019734 GO:0005515
Bva10g01956 201 SMART tpr_5 160 195 IPR019734 GO:0005515
Bva10g01956 201 SMART tpr_5 56 89 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01956 Bva-Chr10 13301263 13306762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01956 53 201 Calmodulin-binding Proteins AT4G28600 54.305 2.83e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01956 K21843 - gmx:100789469 262.692