Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01950 ATGAAATCGAACCAGAAATCCCACATGGCCGATGTTTGTCCACTGCAATCCGAGAGGAGTTGTGACCCAGAAGGAGATAACATGGATGACACAGAAGGCAGAAATAGCGCCATGAACGACATCGATCAACACCTCTCTCGCTGGGACGACATCGAGTGGATCGACTGTTGCAACGCCTATCTCTCGTGGATTGGCGTCTCGAACGATGGAGAATGGAAACTCGCATCTGAGAGAACGGCGAGGGAAAGAGATCCATCCATAATCTTGCATCTTTGTCTAGAATATGCTGAGCAAAGGAAGTTGAATGCTGCCCTTTATCATGCAAAGCAACTGGTTGAGCTTGAAGCTGGGTCTAGTATTAGAGGATATATACTTCTGGCGCGGATATTATCAGCTCAGAAACAGTTTGTTGAAGCTGAGATTGTTATTGATGCTGCTCTGGATCAGTGTGGGAAATGGAATCAAGGAGAATTATTGCGAACAAAAGCTAAGCTGAGGATTGCTCAGGGCCATTTAAAGAGTGCTGTGAAGACATATACTCTTCTACTTGCTGTTCTTCAGATCCAGGCTAAAAGCTCAGGCAGCACAAATAAGTATCTCAAGAGTAAGGGAAACCGCGATCGAAGTTTGGAAATGGAAATATGGCATGATTTAGCCAGCATCTACACTACTTTGTCGCAATGGCGAGATGCTGAGGTTTGTCTTTCAAAATCTCAGGCCATCCATCCTTATTCTGCTTCTAGATTTCATTCCACCGGTTTACTCCATGAAGCTAGAGGCCTTCACCAAGAAGCTCAGAAATCATTTAGGAAAGCATTAGATATCGATCCCAACCACGTGGCCAGTTTGATATCCACAGCCTGTGTTCTCATGCAGCTTGGTGGTCAATCATCACCCATTGCAAGAAGCCTTCTTACTGATGCACTAAGACTAGATAGAACAAACCCTTCTGCTTGGTACAAACTTGGGCTGCTTTACAAAGCTGATGCTGGAGCATCGGCATGGGAAGCTGCTGAATGCTTTGAGGGAGCTGCTATTCTTGAAGAATCTTCTCCAATTGAACCCTTCAGATA 1073 0.4511 MKSNQKSHMADVCPLQSERSCDPEGDNMDDTEGRNSAMNDIDQHLSRWDDIEWIDCCNAYLSWIGVSNDGEWKLASERTARERDPSIILHLCLEYAEQRKLNAALYHAKQLVELEAGSSIRGYILLARILSAQKQFVEAEIVIDAALDQCGKWNQGELLRTKAKLRIAQGHLKSAVKTYTLLLAVLQIQAKSSGSTNKYLKSKGNRDRSLEMEIWHDLASIYTTLSQWRDAEVCLSKSQAIHPYSASRFHSTGLLHEARGLHQEAQKSFRKALDIDPNHVASLISTACVLMQLGGQSSPIARSLLTDALRLDRTNPSAWYKLGLLYKADAGASAWEAAECFEGAAILEESSPIEPFR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01950 357 MobiDBLite consensus disorder prediction 22 37 - -
Bva10g01950 357 SMART tpr_5 120 153 IPR019734 GO:0005515
Bva10g01950 357 SMART tpr_5 212 245 IPR019734 GO:0005515
Bva10g01950 357 SMART tpr_5 246 279 IPR019734 GO:0005515
Bva10g01950 357 SUPERFAMILY TPR-like 157 327 IPR011990 GO:0005515
Bva10g01950 357 PANTHER PROTEIN NPG1 76 357 IPR043376 -
Bva10g01950 357 MobiDBLite consensus disorder prediction 1 37 - -
Bva10g01950 357 PANTHER OS10G0471400 PROTEIN 76 357 - -
Bva10g01950 357 ProSiteProfiles TPR repeat profile. 246 279 IPR019734 GO:0005515
Bva10g01950 357 Pfam Tetratricopeptide repeat 253 279 IPR019734 GO:0005515
Bva10g01950 357 Gene3D Tetratricopeptide repeat domain 79 353 IPR011990 GO:0005515
Bva10g01950 357 SUPERFAMILY TPR-like 84 184 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01950 Bva-Chr10 13237813 13242111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01950 84 357 Calmodulin-binding Proteins AT4G28600 52.313 1.15e-83 267