Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01948 ATGGAAATGTGGCATGATTTAGCCAACATCTACACTACTTTGTCGCAATGGCGAGATGCTGAAGTTTGTCTTTCAAAATCTCAGGCTATCCATCCTTATTTTGCTTCTAGATTTCATTCCACAGGTTTACTCCATGAATCTAGAGGCCTTCACCAAGAAGCTCTGATCAATCCGAACCACAGGGTGAGTTTGATATCCACAGCCTGCGTTCTCATGCAGCTTGGTGGTCAATCATCATCCATTTCGAGAAGCCTTCTTACTGATGCACTAAGACTAGATAGAACAAACCCTTCTGGTTGGTACAATCTTGGGCTGCTTTACAAAGCTGATGCAGGAACATCGGCATGGGAAGCTGCTGAATGCTTTGAGGCAGCTGCTTTTGTTGAAGAATCTTCTCCAATTGAACCCTTCAGATA 416 0.4375 MEMWHDLANIYTTLSQWRDAEVCLSKSQAIHPYFASRFHSTGLLHESRGLHQEALINPNHRVSLISTACVLMQLGGQSSSISRSLLTDALRLDRTNPSGWYNLGLLYKADAGTSAWEAAECFEAAAFVEESSPIEPFR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01948 138 SUPERFAMILY TPR-like 2 125 IPR011990 GO:0005515
Bva10g01948 138 Gene3D Tetratricopeptide repeat domain 1 133 IPR011990 GO:0005515
Bva10g01948 138 PANTHER PROTEIN NPG1 1 138 IPR043376 -
Bva10g01948 138 PANTHER OS10G0471400 PROTEIN 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01948 Bva-Chr10 13230425 13233102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01948 4 138 Calmodulin-binding Proteins AT4G28600 49.655 5.31e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01948 K21843 - gmx:100789469 213.001