Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01936 ATGAGAGTTAAGAGTTGGATAAGGAAGTGGAAATTAAGCATTCAAGTAAGATTGGGGAAGATGATCAAGTGTTTATGCTCCAGGGAGCAGTTAAGGATAGATGAATTAGAATTTTCATCTGAGTCCTTAGCAACCAGGGATTACTCAGCAAGTGGTTATTCATCACGCCCGGGAGAAATAGAAGGAAAGGTTGATAATAGCAACATTGAAGAAGCAGAATCATCTCTTCGTGAAAGCGGTTATTTGAACTATGAGGAAGCTAGAGCGTTATTAGGAAGGCTCGAGTATCAAAAAGGTAATACAGAAGCTGCTCTTCATGTATTTGAAGGAATAGATATTGCTGCTGTGATTCCCAAGATAAAAATCTCTTTATCTAAAAGATGTGAACAAAATAGGCGACTCTCTCAAAGTGATGCAAGGCCTCTTATGTCAATGCATGCTGTTAGTTTACTCCTTGAAGCTGTTTTCCTCAAGGCAAAATCATTGCAGACTCTTGGAAGGATTCAagAAGCTGCTCAATCATGCAAAACTGTTTTAGACACAGTTGAATCTGCACTACCAGAAGGCTTTCCTGAAAACTTTGCTTCAGATTGTAAATTACAAGAGACTCTAACAAAGGCCGTAGAACTGCTTCCTGAGTTATGGAAGCTTGCCGGATCCCCTCAAGACACCATCTTATCATATAGGCGCGCCTTGCTTTATCATTGGAATCTTGACACTGAAACCACCGCAAGAATACAAAAGGATTTTGCTGTGTTTCTTTTGTTCAGTGGTTGTGAAGCAAGTGCTCCAACTCTGCGTTCGCAGTTGGACGGTTCCTTTGTGCCAAGAAACAATATAGAAGAGGCTGTTCTTCTGCTGCTGATTCTGCTGAATAAACttgttaaaagaaagattGTGTGGGATCCTTCAATAATTGAtcatctttcttttgctttaaGCATTTCTGGGGGATTACTAGCTCTAGCTCAACAGGTTGAAGAATTGCTCCCCGGAAGCATGGAGTCCAAAGAAAGATATTTTACTCTAGCTCTTTGTTACTATGGGGAAGGCGAGCATATAATTGCTTTGGATCTTTTGAGAAACTTCTTGAATAACAGAGAGAACTTAAACTGCATAAAAGAATtactactagcttcaaagattTGTGCTGataattctttgtttctagAAGAAGGGATCAACTATTCTAGCAAAGCCATTTTTAAATTGGATGGAAGATGCTGGCAATTGGTAGCAATGGCAAATTGTTTCCTAGGTGTTCTTCTGTCATCAAAATCTAAGTTGGTTGTTTCTGAATCAGAGAGGGATTTGAGGCAGTCTGAAGCACTCAGTGCACTTGAAACTGCTGAGAGAACGGCGAGGGAAAGAGATCCATACATAGTCTTGCATCTTTGTCTAGAATACGCTGAGCAAAGGAAGTTGAATGCTGCCCTTTATCATGCAAAGCAACTGGTTGAACTTGAAGCTGGGTCTAGTATTAGAGGATATATACTTCTGGCGCGGATATTATCAGCTCAGAAACAGTTTGTTGAAGCTGAGATTGTTATTGATGCTGCTCTGGATCAGTGTGGGAAATTGGATCAAGGAGAACTATTGCGAACAAAAGCTAAGCTGAGGATTGCTCAGGGCCATTTAAAGAGTGCTGTGAAGACATATACTCTTCTTCTTGCTGTTCTTCAGGTCCAGGCTAAAAGCTCAGTCAGCACAAATAAGTATCACAAGAGTAAGGGAAACCGCGATCGAAGTTTGGAAATGGAAATATGGCATGATTTAGCCAACATCTACACTACTTTGTCGCAATGGCGAGATGCTGAAGTTTGTCTTTCAAAATCTCAGGCTATCCATCCTTATTCTGCTTCTAGATTTCATTCCACAGGTTTACTTCATGAAGCTAGAGGCCTTCAGCAAGAAGCTCTGAAATCATTTAGGAAAGCATTAGATATCGATCCGAACCACGTGGCGAGTTTGATATCCACAGCCTGCGTTCTCATGCAGCTTGGTGGTCAATCATCATCCATTGCAAGAAGCCTTCTTACTGATGCACTAAGACTAGATAGAACAAACTCTTCTGCTTGGTACAATCTTGGGCTGCTTTACAAAGCTGATGCAGGAACATCGGCATGGGAAGCTGCTGAATGCTTTGAGGCAGCTGCTATTCTTGAAGAATCTTCTCCAATTGAACCCTTCAGATA 2195 0.4 MRVKSWIRKWKLSIQVRLGKMIKCLCSREQLRIDELEFSSESLATRDYSASGYSSRPGEIEGKVDNSNIEEAESSLRESGYLNYEEARALLGRLEYQKGNTEAALHVFEGIDIAAVIPKIKISLSKRCEQNRRLSQSDARPLMSMHAVSLLLEAVFLKAKSLQTLGRIQEAAQSCKTVLDTVESALPEGFPENFASDCKLQETLTKAVELLPELWKLAGSPQDTILSYRRALLYHWNLDTETTARIQKDFAVFLLFSGCEASAPTLRSQLDGSFVPRNNIEEAVLLLLILLNKLVKRKIVWDPSIIDHLSFALSISGGLLALAQQVEELLPGSMESKERYFTLALCYYGEGEHIIALDLLRNFLNNRENLNCIKELLLASKICADNSLFLEEGINYSSKAIFKLDGRCWQLVAMANCFLGVLLSSKSKLVVSESERDLRQSEALSALETAERTARERDPYIVLHLCLEYAEQRKLNAALYHAKQLVELEAGSSIRGYILLARILSAQKQFVEAEIVIDAALDQCGKLDQGELLRTKAKLRIAQGHLKSAVKTYTLLLAVLQVQAKSSVSTNKYHKSKGNRDRSLEMEIWHDLANIYTTLSQWRDAEVCLSKSQAIHPYSASRFHSTGLLHEARGLQQEALKSFRKALDIDPNHVASLISTACVLMQLGGQSSSIARSLLTDALRLDRTNSSAWYNLGLLYKADAGTSAWEAAECFEAAAILEESSPIEPFR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01936 731 ProSiteProfiles TPR repeat profile. 620 653 IPR019734 GO:0005515
Bva10g01936 731 Gene3D Tetratricopeptide repeat domain 585 727 IPR011990 GO:0005515
Bva10g01936 731 Pfam Tetratricopeptide repeat 627 653 IPR019734 GO:0005515
Bva10g01936 731 Gene3D Tetratricopeptide repeat domain 64 584 IPR011990 GO:0005515
Bva10g01936 731 SMART tpr_5 494 527 IPR019734 GO:0005515
Bva10g01936 731 SMART tpr_5 690 725 IPR019734 GO:0005515
Bva10g01936 731 SMART tpr_5 586 619 IPR019734 GO:0005515
Bva10g01936 731 SMART tpr_5 620 653 IPR019734 GO:0005515
Bva10g01936 731 SMART tpr_5 152 185 IPR019734 GO:0005515
Bva10g01936 731 PANTHER OS10G0471400 PROTEIN 14 731 - -
Bva10g01936 731 PANTHER PROTEIN NPG1 14 731 IPR043376 -
Bva10g01936 731 SUPERFAMILY TPR-like 442 558 IPR011990 GO:0005515
Bva10g01936 731 SUPERFAMILY TPR-like 531 701 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01936 Bva-Chr10 13054117 13061049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01936 22 731 Calmodulin-binding Proteins AT4G28600 55.939 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01936 K21843 - gmx:100789469 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01936 10 13054117 13061049 Bva10g01936 10 13054117 13061049 ECH