Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01920 ATGCCACCGGCTCTTTATAACTGCAAAACCCTAGCTTCACACCCACTTCCCTCGTTTGATCTCATTCGTTGTGCCTGTGTGTGCTTCAGCAGTCACAGACCTTACTCGCCGAAAATGCCTTTCAAGAGGTTCATTGAGATCGGGAGGGTTGCTCTCATCAACTATGGGAAAGATTATGGCAAGCTTGTTGTCATCGTCGACGTCATTGACCAAAACAGGGCTCTTGTGGATGCCCCCGATATGGTCAGGACCCAAATGAATTTCAAGAGGCTCAGTCTGACAGACATTAAGATTGACATTAAGAGGGTTCCAAAGAAGAAGGATCTCCTTAGTGCAATGGAGGCCGCTGATGTTAAGAAGAAATGGGAGAATAGCTCATGGGGAAGAAAATTGATTgttcaaaagaaaagggcTTCTCTCAATGATTTTGACAGGTTCAAGCTTATGTTGACGAAGATCAAGAGGGCTGCTGTTGTAAGGCAAGAGCTTGCTAAGTTGAAGAAGGCAGCTTA 512 0.4395 MPPALYNCKTLASHPLPSFDLIRCACVCFSSHRPYSPKMPFKRFIEIGRVALINYGKDYGKLVVIVDVIDQNRALVDAPDMVRTQMNFKRLSLTDIKIDIKRVPKKKDLLSAMEAADVKKKWENSSWGRKLIVQKKRASLNDFDRFKLMLTKIKRAAVVRQELAKLKKAA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01920 170 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 39 169 - -
Bva10g01920 170 Pfam Ribosomal protein L14 83 155 IPR002784 GO:0003735|GO:0005840|GO:0006412
Bva10g01920 170 Gene3D - 130 165 - -
Bva10g01920 170 PANTHER 60S RIBOSOMAL PROTEIN L14 39 169 IPR039660 GO:0003723|GO:0003735
Bva10g01920 170 Gene3D - 39 122 IPR014722 -
Bva10g01920 170 SUPERFAMILY Translation proteins SH3-like domain 43 131 IPR008991 -
Bva10g01920 170 CDD KOW_RPL14 45 117 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01920 Bva-Chr10 12929670 12931328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01920 39 168 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 82.308 1.37e-75 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01920 K02875 - sly:101252219 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01920 10 12929670 12931328 Bva10g01920 10 12929670 12931328 ECH