Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01913 ATGGATCACGTTATTGGAGGAAAATTCAAGCTCGGGCGGAAGATTGGCAGTGGATCGTTTGGCGAGCTTTACATGGCTGTTAACGTGCAAACTGGGGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCTCAGCTTCACTATGAGTCGAAATTATATATGCTTCTTCAAGGAGGAACTGGTATACCACATTTGAAATGGTTTGGAGTGGAGGGTGACTACAATGTCATGGTTATTGATCTTCTTGGACCAAGTCTAGAAGACTTGTTTAATTACTGCAATCGAAAATTCTCTTTGAAAACAGTTTTGATGCTTGCAGATCAACTAATAAATAGAGTTGAGTACATGCACTCCCGGGGATTTCTTCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTGGGCCGCAAGGCAAACCAGGTCTATATTATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTTCAAACACATAAGCACATACCATACAGGGAAAACAAGAATCTGACAGGAACTGCCCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCGCTTGGTTATGTGCTCATGTATTTTCTGAGGGGAAGtcTCCCTTGGCAAGGCTTGAAAGCGGGGACTAAGAAGCAGAAATATGACAAGataagtgaaaagaaaatgcttaCTCCAATAGAGGTCCTATGCAAATCACATCCATCAGAATTTGTATCATACTTCCACTATTGTCGGTCATTGCGATTTGAAGACAAACCTGATTATTCATACCTGAAGAGACTTTTCCGGGACCTGTTCATTAGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATTTTGAAGTATCCACAAATTGGATCCAGCTCTAGAACACGACCCAATGGGAAAGCAGTTATAAACCCTGGAGCATCTGCAGAACGACCTTCAGTTGGACAAGAAATTCGAGATAGATTCTCAGGTACAGTGGAGGCATTTGCTAGAAAGAATGGTTCTGGGCTTGGTCTGCATGGCGACCACTCTAGACACAGGGCTTCAGATGATGTGCCATCTTCCAAAGATGTGCAAGCTGACTCTGAGAGGGCTCATAGTTCTTCTCGTAATGGCAGTGCTTCAAAAAGGCCAGTCATATCAAGCAGCAGACCAAGCTCCTCCGGTGAGCCTGGTGAAAGCCGTTCTAGTAGATTGGCAAGCAGTGGTCGTCTATCCACAACTCACAGGATTCAACCTGGGTTTGAGTCCAAAACATTGTCTCTTTCGCGTCCTACCGCGGCGAGAGGTGGACGCGATGATACACTGAGGAGCTTTGAGCTGCTGTCGATTGGTacagggaaaagaaaatg 1379 0.43 MDHVIGGKFKLGRKIGSGSFGELYMAVNVQTGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSHPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPNGKAVINPGASAERPSVGQEIRDRFSGTVEAFARKNGSGLGLHGDHSRHRASDDVPSSKDVQADSERAHSSSRNGSASKRPVISSSRPSSSGEPGESRSSRLASSGRLSTTHRIQPGFESKTLSLSRPTAARGGRDDTLRSFELLSIGTGKRK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01913 459 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bva10g01913 459 MobiDBLite consensus disorder prediction 300 325 - -
Bva10g01913 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva10g01913 459 MobiDBLite consensus disorder prediction 347 373 - -
Bva10g01913 459 PANTHER CASEIN KINASE-RELATED 1 446 - -
Bva10g01913 459 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01913 459 Gene3D Transferase(Phosphotransferase) domain 1 1 327 - -
Bva10g01913 459 SMART serkin_6 9 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01913 459 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01913 459 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 446 - -
Bva10g01913 459 MobiDBLite consensus disorder prediction 342 459 - -
Bva10g01913 459 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva10g01913 459 MobiDBLite consensus disorder prediction 374 433 - -
Bva10g01913 459 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01913 Bva-Chr10 12878954 12884973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01913 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 5.68e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva10g01913 Pkinase 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01913 K08960 - mnt:21404312 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01913 10 12878954 12884973 Bva10g01913 10 12878954 12884973 ECH