Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01911 ATGGAAGCTACAAGGTGTTGGTTTAATAAATTCAAGTCAAAGGACAAAGTGAAGTCACAAAAGAACAAGGAAACTACAAGTACTGGAAAAGAAGTGTCAAAACCCCCAACAAATGACGAAGCTCCTTCCAATGTAACCAAACAGAAGGTTGCAGCTGCCAAGGAATACATAGAAAACCATTACAAGAAGCAGATGAAGGACCTGCAGGAAAGAAAGGAACGGCGTAATATGCTAGAAAAGAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAACTTGCTTAAGtatttggagaaaaaagaaacagaatacATGCGCCTTCAGAGGCATAAGATGGGAGCTGAAGATTTTGAGCCACTAACTATGATAGGGAAGGGCGCATTTGGAGAGGTTAGAGTGTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGTCAGGTTGAACATGTAAAAGCTGAGAGGAATCTACTTGCGGAAGTTGACAGCAATTGCATTGTGAAACTTTATTGTTCCTTTCAAGATGAAGAATACTTATATCTCATTATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAGGACACACTAACAGAAGATGAGGCCAGATTCTATGTTGGCGAGACTGTCCTAGCTATTGAGTCAATTCacaaacataattatattcataGAGATATCAAGCCAGACAACTTGCTTCTAGATAGAAATGGTCACATGAAGTTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCACTATAGGAAGCAATCTAAGTGGAGCTCTTCAGAGTGATGGACGCCCCATGGCACCTAAACGAACTCAACAAGAGCAGCTGCAGCATTGGCAGAAAAATAGGAGAATGCTTGCCTATTCCACAGTTGGGACGCCTGACTATATTGCCCCAGAAGTTCTTCTGAAGAAGGGATATGGGATGGAGTGTGATTGGTGGTCTCTGGGTGCTATAATGTATGAAATGCTTGTGGGGTTTCCACCTTTTTATTCAGATGAACCAATGGCAACTTGTAGAAAGATAGTAAATTGGAGAAcgaatttaaaatttccagAAGAAGCTAAACTATCCCCAGAAGCAAAGGATCTTATTTGTAGACTTCTGTGTAATGTGGATCAGAGGCTTGGCACAAGAGGGGCAGATGAAATAAAGGCTCACCCATGGTTCAAGGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCATTTATTCCCGAGGTGAATGATGAATTGGACActcaaaattttgagaagtttgaagaGGTGGACAACCAAACTCAACCTCCCTCAAAATCAGGCCCCTGGAGAAAGATGCTTTCATCTAAAGACATTAACTTCGTTGGGTACACATATAAGAACTTTGAGATTGTGAACGATCATCAACTACCTGGAATCTCtgaattgaagaagaagagcatAAAAACTAAAAGGCCATCTATTAAGACCCTATTCGACGATGAGTCTGCGGCATCGGCGAACCAACCTGTTCATGGGAGCTTCTTAAACCTCTTACCTCCTCAAATGGAAGTTCCTGAGAAAAATGAGTCACAATG 1643 0.395 MEATRCWFNKFKSKDKVKSQKNKETTSTGKEVSKPPTNDEAPSNVTKQKVAAAKEYIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGAEDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFTIGSNLSGALQSDGRPMAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMATCRKIVNWRTNLKFPEEAKLSPEAKDLICRLLCNVDQRLGTRGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQPPSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQLPGISELKKKSIKTKRPSIKTLFDDESAASANQPVHGSFLNLLPPQMEVPEKNESQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01911 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva10g01911 547 MobiDBLite consensus disorder prediction 515 547 - -
Bva10g01911 547 Gene3D Transferase(Phosphotransferase) domain 1 203 280 - -
Bva10g01911 547 Gene3D Transferase(Phosphotransferase) domain 1 310 438 - -
Bva10g01911 547 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01911 547 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bva10g01911 547 Gene3D Phosphorylase Kinase; domain 1 90 202 - -
Bva10g01911 547 MobiDBLite consensus disorder prediction 516 530 - -
Bva10g01911 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 521 - -
Bva10g01911 547 MobiDBLite consensus disorder prediction 14 28 - -
Bva10g01911 547 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01911 547 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva10g01911 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Bva10g01911 547 CDD STKc_NDR_like 117 482 - -
Bva10g01911 547 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01911 547 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 521 - -
Bva10g01911 547 Coils Coil 61 95 - -
Bva10g01911 547 MobiDBLite consensus disorder prediction 14 47 - -
Bva10g01911 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Bva10g01911 547 MobiDBLite consensus disorder prediction 29 45 - -
Bva10g01911 547 SUPERFAMILY Protein kinase-like (PK-like) 93 471 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01911 Bva-Chr10 12863593 12871660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01911 1 541 AGC Kinase Gene Family AT4G14350 83.179 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bva10g01911 Pkinase 9.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01911 K08790 - mnt:21404309 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01911 10 12863593 12871660 Bva10g01911 10 12863593 12871660 ECH