Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01895 ATGACTGAACTTCTCAAACGAGACTACGTCGTTTCATCAGAGCTCGGCCGCGGACGATTCGGCGTCGTTTCCCGCTGTGTCGCCGTGGACTCCGGTGAATCCTTCGCCGTTAAATCCATGGATAAGCGGGTTATTTCCGCGGGAGACTCCCTCGACGCCCAATGCCTCCTAACTGAGCCCAAGATTCTCCACCTTCTCTCTCCTCACCCTCACATCACCACCGTCCACGCCGTCTACGAGGACGAAAACGACCTCTACATGGTCATCGACCTCTGTAGTTCCTCCGATCTCCATGACCGGGTTGTCTCACGGGTCGTACCAGAACCCGAGGCTGCTTCCCTTATGCGGCAGCTAATGCAAGCCGTCGCACACTGCCACCGGCTTGGCGTGGCTCACCGAGACATTAAGCCCGATAATATACTCTTTGATGAAGAGAACCAGCTCAAGCTAGGCGATTTCGGGTCGGCTGAGATGATCCGGGAGGGTGAACAGATGACTGGGGTAGTGGGGACCCCGTATTACGTGGCGCCGGAGGTTCTTGCTGGCGGGGATTACAATGAGAAAGTTGATGTGTGGAGTGCTGGTGTCGTTTTATATGTAATGCTGTCTGGGTTCCCGCCGTTTTATGGCGATTCTGCTGTGGAGATTTTTGAAGCGGTGCTTAGAGGGAACTTGAGGTTCCCAAGCAGGGCTTTCCAAGGCGTCTCGACGGCGGCGAAGGATCTGCTCCGGAGAATGCTTTCTAGAGATGTTTCTAGAAGGTTCTCAGCAGAGCAAGTTCTGAGGCACCCATGGTTCAACATTGCAGGAGAGAGCATGGCAACAGGGTG 830 0.5482 MTELLKRDYVVSSELGRGRFGVVSRCVAVDSGESFAVKSMDKRVISAGDSLDAQCLLTEPKILHLLSPHPHITTVHAVYEDENDLYMVIDLCSSSDLHDRVVSRVVPEPEAASLMRQLMQAVAHCHRLGVAHRDIKPDNILFDEENQLKLGDFGSAEMIREGEQMTGVVGTPYYVAPEVLAGGDYNEKVDVWSAGVVLYVMLSGFPPFYGDSAVEIFEAVLRGNLRFPSRAFQGVSTAAKDLLRRMLSRDVSRRFSAEQVLRHPWFNIAGESMATG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01895 276 SUPERFAMILY Protein kinase-like (PK-like) 4 267 IPR011009 -
Bva10g01895 276 Pfam Protein kinase domain 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01895 276 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 4 272 - -
Bva10g01895 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva10g01895 276 PIRSF ILK 2 263 - -
Bva10g01895 276 Gene3D Phosphorylase Kinase; domain 1 10 97 - -
Bva10g01895 276 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 272 - -
Bva10g01895 276 CDD STKc_CAMK 8 265 - -
Bva10g01895 276 SMART serkin_6 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01895 276 Gene3D Transferase(Phosphotransferase) domain 1 98 275 - -
Bva10g01895 276 ProSiteProfiles Protein kinase domain profile. 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01895 276 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01895 Bva-Chr10 12762578 12764070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01895 9 272 EF-hand Containing Proteins AT1G50700 42.751 9.93e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva10g01895 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01895 - K08794 jre:108991068 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01895 10 12762578 12764070 Bva10g01895 10 12762578 12764070 ECH