Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01885 ATGAACGCTGCTCAAATCCAAATGAATTCTTCCTCAATTTTCAACCCTACGAATTCCGATTACTCGCCGGAATCCTCCTTCGGTTCGCCGGAATCGTTTTCATGGAATTTTGAGCAAGATTACCTTCCTTTCAATGAGAATGACCCTGAAGAGATGCTTCTCTATGGTCTAATTTCAAAGGCTAGCAATAGCAATGTCCACCAACAAGCAACCAACATTGACACGCCGTGCCAGAGAGCCGCCGTGAAGGAAGAAGAGGTGAGCTCGGAGGAGAAAGAATTCAGCCGGAGCCCAGCAAAGGAGAAGTCCTACCGCGGTGTCAGACGCCGGCCATGGGGTAAATTCGCTGCGGAGATAAGGGATTCCACTAGGCATGGCATAAGGGTGTGGTTGGGGACATTTGACAGCGCAGAAGCAGCAGCTTTAGCTTATGACCAAGCTGCTTTTTCCATGAGAGGCTCTTCAGCAATACTCAACTTCCCAGTTGAGAGGGTAAGGGAATCACTCAGAGACATCAACTATGACTCCGAGGAATCTGGTTCCCCGGTGGTGGCTTTGAAGAGAAAGCACTCAATGAGAAGAAAAGTCTCCAACAAGAAGCACAAAGACAGAGATGTCAGAATAGACAATGTGGTCGTCTTAGAAGATCTTGGTTCAGATTACCTAGAACAATTATTGATGTCGTCGGAAAATTCCACAGCTTGgtg 707 0.471 MNAAQIQMNSSSIFNPTNSDYSPESSFGSPESFSWNFEQDYLPFNENDPEEMLLYGLISKASNSNVHQQATNIDTPCQRAAVKEEEVSSEEKEFSRSPAKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSAILNFPVERVRESLRDINYDSEESGSPVVALKRKHSMRRKVSNKKHKDRDVRIDNVVVLEDLGSDYLEQLLMSSENSTAW 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01885 235 SMART rav1_2 103 167 IPR001471 GO:0003700|GO:0006355
Bva10g01885 235 Pfam AP2 domain 103 153 IPR001471 GO:0003700|GO:0006355
Bva10g01885 235 ProSiteProfiles AP2/ERF domain profile. 103 161 IPR001471 GO:0003700|GO:0006355
Bva10g01885 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 37 228 - -
Bva10g01885 235 SUPERFAMILY DNA-binding domain 103 163 IPR016177 GO:0003677
Bva10g01885 235 MobiDBLite consensus disorder prediction 1 31 - -
Bva10g01885 235 PRINTS Ethylene responsive element binding protein signature 104 115 IPR001471 GO:0003700|GO:0006355
Bva10g01885 235 PRINTS Ethylene responsive element binding protein signature 143 163 IPR001471 GO:0003700|GO:0006355
Bva10g01885 235 CDD AP2 102 162 IPR001471 GO:0003700|GO:0006355
Bva10g01885 235 Gene3D AP2/ERF domain 102 163 IPR036955 GO:0003700|GO:0006355
Bva10g01885 235 PANTHER DNA-BINDING DOMAIN 37 228 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01885 Bva-Chr10 12629276 12630732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01885 19 235 AP2-EREBP Transcription Factor Family AT3G23240 61.607 7.29e-83 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva10g01885 AP2 8.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01885 K14516 - jre:109007057 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01885 10 12629276 12630732 Bva10g01885 10 12629276 12630732 ECH