Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01884 ATGGAAGAGAGGCAGAGAGGGAAGCaggagaaggaagagaagCCCCGGGAAGAAGTCCGGTACCGCGGCGTGCGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATACGGGACCCGTCGAAGCAGGGAGCCAGGCTGTGGCTGGGGACGTTTGACGCGGCGGAGGATGCAGCTCGAGCGTATGATCGTGCTGCGTTTAACTTGAGGGGTCATCTTGCAATTCTCAATTTCCCTAATGAGTATTATTCTCAAGTTAGGGGATCTCCTCCCTATCCTCCCCAtttatcatcatcttcttcttcttcttaccAGAGTGGAAGCTCAAGCTCAGCTTCAGGATCGCAACAAAGGCAAGTTTTTGAGTTTGAGTATTTGGATAATAAGGTGTTGGAAGACATGCTTGAGGCTGAAgaggaaaagaggaaaaggatGGGAGATTG 440 0.4659 MEERQRGKQEKEEKPREEVRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDAAEDAARAYDRAAFNLRGHLAILNFPNEYYSQVRGSPPYPPHLSSSSSSSYQSGSSSSASGSQQRQVFEFEYLDNKVLEDMLEAEEEKRKRMGD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01884 146 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Bva10g01884 146 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Bva10g01884 146 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g01884 146 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Bva10g01884 146 PANTHER ETHYLENE RESPONSE FACTOR 1 138 - -
Bva10g01884 146 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Bva10g01884 146 PANTHER DNA-BINDING DOMAIN 1 138 IPR044808 GO:0003700|GO:0009873
Bva10g01884 146 MobiDBLite consensus disorder prediction 83 116 - -
Bva10g01884 146 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Bva10g01884 146 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Bva10g01884 146 MobiDBLite consensus disorder prediction 90 116 - -
Bva10g01884 146 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Bva10g01884 146 Coils Coil 127 146 - -
Bva10g01884 146 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01884 Bva-Chr10 12609175 12609615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01884 17 141 AP2-EREBP Transcription Factor Family AT3G23230 68.000 1.12e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva10g01884 AP2 5.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01884 - - tcc:18603202 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01884 10 12609175 12609615 Bva10g01884 10 12609175 12609615 ECH