Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01883 ATGGACGAAGAAAGCTCGAGGGGGAAGACAAAGGAGGAAGGAGGAGACGTCCGGTACCGCGGCGTCCGGAGGCGGCCGTGGGGGAAATTCGCAGCGGAGATTCGCGATTCCACGAGGCAGGGTCAACGGATATGGCTCGGAACCTTCAACACGGCAGAGGAAGCAGCCAGAGCCTATGACCGAGCTGCTTATGCCATGAGGGGCCCTTTTGCTGTCCTGAATTTCCCAGATGAGTACCCTTTGTCAGCTGGCGGCGCCGCCTCTCATTCTTCGGCTTCTACTTCtacttctgcttctgcttctgctccTGCTTCTACTTCTACTTCGAGGCCTGGGAATGTGGAGAATGCAAGGCAAGTTTTCGAGATCGAGTACTTGGATGACAAATTGCTAGAGGAGCTTCTTGATTAcgaggagaaaaagaagaatggaacgtg 437 0.4874 MDEESSRGKTKEEGGDVRYRGVRRRPWGKFAAEIRDSTRQGQRIWLGTFNTAEEAARAYDRAAYAMRGPFAVLNFPDEYPLSAGGAASHSSASTSTSASASAPASTSTSRPGNVENARQVFEIEYLDDKLLEELLDYEEKKKNGT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01883 145 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Bva10g01883 145 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Bva10g01883 145 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Bva10g01883 145 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Bva10g01883 145 PANTHER DNA-BINDING DOMAIN 7 139 IPR044808 GO:0003700|GO:0009873
Bva10g01883 145 MobiDBLite consensus disorder prediction 1 20 - -
Bva10g01883 145 PANTHER ETHYLENE RESPONSE FACTOR 7 139 - -
Bva10g01883 145 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Bva10g01883 145 MobiDBLite consensus disorder prediction 86 115 - -
Bva10g01883 145 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Bva10g01883 145 MobiDBLite consensus disorder prediction 82 118 - -
Bva10g01883 145 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Bva10g01883 145 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01883 Bva-Chr10 12598586 12599023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01883 18 142 AP2-EREBP Transcription Factor Family AT3G23230 60.800 4.81e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva10g01883 AP2 2.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01883 - - gmx:100775830 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01883 10 12598586 12599023 Bva10g01883 10 12598586 12599023 ECH