LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva10g01882	ATGGATCTTGTAACCAAGAGATATTTGATCCATGTTTCCTCACATGGGTCAGGAGCTTTCCCTCCCATTACAAATCCAGAAAGCTCAATCCTTCATCCTCATTTttattctccttcttcttctaccAGTTTTCCCGTTATAGCCATTGCCATAATAGGAATAGTCGCCACAGCTTTCTTGCTTGTGAGTTATTATATCTTTGTGATCAAATGCTGTCTCAATTGGCACCGCATTGATCTTCTAAGGCGATTTTCACCATCCCTCCGGCGGGAAGAGCTGCCGGGGACTTACTCTCCGGGGAGGGAGCTCCGGGGACTCGGCGAGGCCATGATTAGATTAATTCCAGTGATTCAATACAAGACAGAGGAAAACAGAGACATTAATGAGTGTTCTGTTTGCTTGAATGAGTTTCAAGAGGGTGAAAAGCTAAGAATGATACCAAATTGTGGCCATTTTTTCCACATTGATTGCGTAGATGTTTGGCTTCAAAATAATGCCAATTGTCCACTTTGCAGGACAAGCATTTCCTTCTCAAACAAGTTCCAAATTGAACAGATTCTCAATCCAAGGCCCTCAACCCAAGATAGGGGAAGCCCATGTGGTGAAAATCCCATTAATGGGGATGAAGATTTTGTGGTGATTGAATTGGGAAATGATCAAAATAGAGAACAAGACTTGCATGGAACACAAGAGAGAGTCAATGAATTGGAGCTACCAATAACAAGACCTCCCATTATACCTTCACCAGGGAAATTAGAGCAGAGGATTCTGCAGAAGAAAGCAAGGAAACTGCAGAAAGTGACCAGCATGGGTGATGAGTGTATTGATATAAGATCAAAAGATGATCAATTTTCAGTTCAACCCATTAGAAGATCTTTCTCTATGGATTCCTCAGTTGACAGACAACTCTATTTGGCAGTTCAAGAGGCTCTGAaccagcagcagcagcagaacAGGCAAGTCAATGAGCTTGGCTCCATTGAAGGGTGTAGTGGTAGAGTTAAAAGaccatttttttcatttgggtATGGTAATAGGTCAAGAAGTGCAGTGTTACCAGTTCATTTGGACCCATA	1076	0.3978	MGDECIDIRSKDDQFSVQPIRRSFSMDSSVDRQLYLAVQEALNQQQQQNRQVNELGSIEGCSGRVKRPFFSFGYGNRSRSAVLPVHLDP	89

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva10g01882	89	PANTHER	RING-H2 FINGER PROTEIN ATL16	1	88	-	-
	Bva10g01882	89	PANTHER	RING-H2 FINGER PROTEIN ATL16	1	88	IPR044600	GO:0016567\|GO:0016740
	Bva10g01882	89	Coils	Coil	35	55	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva10g01882	Bva-Chr10	12587509	12587778	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva10g01882	1	89	C3H Transcription Factor Family	AT1G04360	54.082	1.16e-18	76.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva10g01882	-		-	gmx:100775286	123.25

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva10g01882	10	12587509	12587778	Bva10g01882	10	12587509	12587778	ECH