Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01878 ATGGATAAGCTTGTGGGAGAGAACAGGTATGGACTTATGGGTGTGTGCAGAAAGTTCAAGCCCCATATCTACATGGTTTTAACCCAGCTGGGTTATACCTTCTTGTATTTCATCACTGAAGCTTCATTCAATCATGGCATGAATCCTCATGTGTATGTAACCTACCGGAATATCGTGGCCGGCCTCGTAATACTGCCATTTGCCTATTTCCTTGAGAGAAAACTAAGGCCAAAGCTCACAATAGCTCTTTTCTTAGAGATTTTTGTGCTTTCTCTATTGGGGATCAGTTTGACTCTTAATATGTACTTTGCAAGCCTGCGATACTCCTCTCCAACCTTCGTTGCTTCAATGGTCAACACCATAGCTTCCCTGACCTTCATAATTGCAGTGGCACTCAGGATGGAGGTTCTTAATCTTCGAGATCCACGCGGTATAGCAAAGGTTCTTGGGACCTTGGTATCCTTAGCTGGTGTGATGATCATGACATTATACAAAGGACCTATTATGAGGAATTTAGGGCATCCTCTAATCCAAATACAAGGGAAAGATGCTAATGTCCATGAAAACTGGCTAATGGGCTTAATTCTTATTGTTACGGGCTGCATAGGATGGTCTTTTTGGTACATTATGCAGGCAATGACCCTTAAAAGATATCCAGCTCAACTATCACTGACCACATGGATGTGTTTAGTTGGAGCTGCGCAATCAGCTGTTTACACAGTGATAGTAGCACATAAACCTTCAGATTGGATCATAGGTCTCAATGTTGACTTCTGGTCCACTATGTATGGTGGAGTTGTTGCATCTGGTTCGATAATATTCATTCAACTATGGTGCACAGAGGAAAAAGGACCAGTTTTTGTCACTATGTTTAACCCCCTGGGTACAGTGTTTGTGGCAGTGCTAGCATATTTTGTCTTCAATGAGAAACTCTATTTGGGCAGCATTATTGGTGCAGTTATTGTGATTATTGGTCTCTACTTGCTGTTGTGGGGAAAAGGAATTGACCATGAGGTTAACAAGAAGACAAAAGAGCAATTGCAGTGCGACAGTGAACATCTTGAATCCAGAGTATA 1076 0.4191 MDKLVGENRYGLMGVCRKFKPHIYMVLTQLGYTFLYFITEASFNHGMNPHVYVTYRNIVAGLVILPFAYFLERKLRPKLTIALFLEIFVLSLLGISLTLNMYFASLRYSSPTFVASMVNTIASLTFIIAVALRMEVLNLRDPRGIAKVLGTLVSLAGVMIMTLYKGPIMRNLGHPLIQIQGKDANVHENWLMGLILIVTGCIGWSFWYIMQAMTLKRYPAQLSLTTWMCLVGAAQSAVYTVIVAHKPSDWIIGLNVDFWSTMYGGVVASGSIIFIQLWCTEEKGPVFVTMFNPLGTVFVAVLAYFVFNEKLYLGSIIGAVIVIIGLYLLLWGKGIDHEVNKKTKEQLQCDSEHLESRV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01878 358 PANTHER WAT1-RELATED PROTEIN 19 347 - -
Bva10g01878 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 334 - -
Bva10g01878 358 PANTHER WAT1-RELATED PROTEIN 19 347 IPR030184 GO:0016021|GO:0022857
Bva10g01878 358 Coils Coil 344 358 - -
Bva10g01878 358 Pfam EamA-like transporter family 41 162 IPR000620 GO:0016020|GO:0016021
Bva10g01878 358 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Bva10g01878 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01878 Bva-Chr10 12565904 12568327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01878 14 348 Nodulin-like Gene Family AT4G08300 38.824 1.08e-86 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01878 10 12565904 12568327 Bva10g01878 10 12565904 12568327 ECH