Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01871 ATGATCATGGCTGCTGCTACTGCAACTGGCTCTTCTTCTGCTGCACTGCCTCCGAAAAGCAACGCATTTgcaaaacatgaaagaaattacaaaaataacaaagagaAAATCCAGAAGTGGAAAGGAGCTCTTATGGAAGCAGCTAATTTATCTGGGTGGCACTCTAAGAATTATAGGACGGAATATGAACTTGTTGAGAACATTGTCAATAATATTCTACAAAAACTGAATCATTTGTACTCAAATGATCTAAATAAGTTTGTCGGAATTGAGCACAACTATGCTTGTATAGAATCAATGCTGAAAATTGGGTCAAGGAATATTCGAATAGTTGGAATTTGGGGCATCGGCGGCATAGGAAAAACAACTCTTGCTGCTGTTGCATATGCCAAACTCTCTTCTCGCTACGAGGCTAGTTGTTTCTTGGCAAATGTAAGGGAGGAAGCAACCAATCATGGACTGAATTATTTGCGCAATAAACTTCTATCTGAGCTACTTGACGATAAAGATGTCTATATTAGTACTCCCTTGGCTTTGATAACTTTTATGTATGGAGATCATATACAAATGCATGACTTGATATATGAAATGGGTAAAGAAATTGTCCGTCAAGAGTGCAGAAAAAATCCTGGAAGACGAAGTCGACTATGGGATCCTGAAGAAATATATGACATATTTCAAAACAACGAGgTGACTGATGCAGTGGAAGGCATAATCTTCAACATGTCTCAAATTAAGTCAGATACATTTTTAAGCCCTGATACATTTACGAAGATGACTAATTTGAGAATTCTGATATTTCTTTGTGGTTGTTCACTTGAGAGACATTATAATGTGTCCTTTCCTACATCTCTTGATTTTTTGCCTAATAGTATAAGGTATCTTGTTTGGGAAGTATATCCTTTCAAGTCGTTGCCAACAACCTTTTGTCCAAGAAATCTTGTTGAGATTTCCATGACGATGAGCAAGGTTGAAAAACTTTGGGATGGAATTCagGATCTTGTACATctgatcaaaattaatttttttaactgtaGTCACTTGAAAGAGCTACCGGATTTCTCTATGGCATTCAATCTTGAGTATGTAAACCTTGGTTTTTGTAGTAGTTTGTGTGAAGTGCATCCATCCATTCTATCTCTCCAAAAGCTTGTTCGACTCTCATTAACGCGTTGTGAACGCCTCAAGTGTCCTGAAATTATCATTCATTCAAGATGTCTAAGAATTCTTGATGTCGGTTTTTGTTCaagtttgaagaaaatttcaattatgtcAAAGGAGATGAGGAATTTATCTTTCGAAGGGACAGCTGTTGTTGAATTGTCCTCGTCAATTGGGAGCCTCGATAAGCTTTCAGAATTGAAAATACCTAAGTTTTTTCCTCTGGAGAATCTTCCAAATAAGTTGACATATCTTCGATGCCTTAATCTTTCTGGTTTTAAACAGGTTAACTCATCTAAGCTAGCAATcttatttaatgaattaagCTCTTTGGGAGAACTGTATCTAACAAACTGTCGAAACTTATACCAAGTACCTGACAACATCAACCTCTTATCACATTTAGGTATTTTAGATCTATCAGGAACCAATGTGGAGACTTTGCCTGCAAGCATAATCCACCTGTCAAAGTTATATTATCTCTCGTTAGTAGAATGCATGAGGCTTCAGCTTGTTCCAGAGTTTCCACCATCTCTTAGAATACTAAATGTCAGAAACTGCACATCCCTAGAGGCATTAGCTTTGGCTTCGGCTTGTAATGAAGGAAAGCTAGAGATTTCTCTGGAGAATTGTATGAAATTGAATGGAAATTGTGTGAACACCATGCTGAAAAGAATGAAGGAAGGGGCAATTTCCAGAATTGTTTACCCAGGAAGCAAGGTTCCAAACTGGTTTAGCCATCAAACAACAGGAGCTGCCATAACTATTGAGCCTCAATGTCCTTCTAGTTCCAATTTATTACGCAGTGCAGTTTTCTGTCTTGTTGTTTCATCACCAGAGAAGTCCAGTATCGTTTCGCATATTGGATGTAAATACGATATGGGGGATGGTGTAAAGTTTCGATGCACGAGTTATGATCCGTTTTATTATCACACCAGTGACAAGGCAAAAAGAACATTTGGCATATTGGATCACGTGTTTGTATGGTATGATGATTTGACTTTGTTAAATCAGTCAAAggtttcatttgaattttttgttgatCCTAGAAAGAAGACGGGGGAAGTTGCAATTTCAATTAAAGGGTGTGGGGTGCAGCCTATATATGACACCAAAAATGAACATGTCActgcttcttcttttgctaACATCAGAAATGAGAAAGAATTGGAAGCACTAGTTATCCCTCCAATACAGAAATCCATGTTTCCTACCCTTTCAACTGCAACAAACTGGAAAAATCAAAGCAAGGGCTTGACTGATATACTCTCTCCTTA 2438 0.3589 MIMAAATATGSSSAALPPKSNAFAKHERNYKNNKEKIQKWKGALMEAANLSGWHSKNYRTEYELVENIVNNILQKLNHLYSNDLNKFVGIEHNYACIESMLKIGSRNIRIVGIWGIGGIGKTTLAAVAYAKLSSRYEASCFLANVREEATNHGLNYLRNKLLSELLDDKDVYISTPLALITFMYGDHIQMHDLIYEMGKEIVRQECRKNPGRRSRLWDPEEIYDIFQNNEVTDAVEGIIFNMSQIKSDTFLSPDTFTKMTNLRILIFLCGCSLERHYNVSFPTSLDFLPNSIRYLVWEVYPFKSLPTTFCPRNLVEISMTMSKVEKLWDGIQDLVHLIKINFFNCSHLKELPDFSMAFNLEYVNLGFCSSLCEVHPSILSLQKLVRLSLTRCERLKCPEIIIHSRCLRILDVGFCSSLKKISIMSKEMRNLSFEGTAVVELSSSIGSLDKLSELKIPKFFPLENLPNKLTYLRCLNLSGFKQVNSSKLAILFNELSSLGELYLTNCRNLYQVPDNINLLSHLGILDLSGTNVETLPASIIHLSKLYYLSLVECMRLQLVPEFPPSLRILNVRNCTSLEALALASACNEGKLEISLENCMKLNGNCVNTMLKRMKEGAISRIVYPGSKVPNWFSHQTTGAAITIEPQCPSSSNLLRSAVFCLVVSSPEKSSIVSHIGCKYDMGDGVKFRCTSYDPFYYHTSDKAKRTFGILDHVFVWYDDLTLLNQSKVSFEFFVDPRKKTGEVAISIKGCGVQPIYDTKNEHVTASSFANIRNEKELEALVIPPIQKSMFPTLSTATNWKNQSKGLTDILSP 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01871 812 SUPERFAMILY L domain-like 189 625 - -
Bva10g01871 812 MobiDBLite consensus disorder prediction 6 28 - -
Bva10g01871 812 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 178 743 IPR044974 GO:0006952
Bva10g01871 812 Pfam C-JID domain 623 759 IPR045344 -
Bva10g01871 812 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 178 743 - -
Bva10g01871 812 Pfam Leucine Rich Repeat 313 332 IPR011713 -
Bva10g01871 812 Gene3D - 16 77 IPR035897 -
Bva10g01871 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 172 IPR027417 -
Bva10g01871 812 Gene3D - 78 208 IPR027417 -
Bva10g01871 812 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 171 - -
Bva10g01871 812 PRINTS Disease resistance protein signature 379 395 - -
Bva10g01871 812 PRINTS Disease resistance protein signature 110 125 - -
Bva10g01871 812 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 171 IPR044974 GO:0006952
Bva10g01871 812 Gene3D Ribonuclease Inhibitor 426 618 IPR032675 -
Bva10g01871 812 Gene3D Ribonuclease Inhibitor 226 425 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01871 Bva-Chr10 12533749 12539692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g01871 178 555 WRKY Transcription Factor Family AT4G12020 35.476 6.20e-53 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g01871 - - gmx:100799103 423.705